RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 RNF214Q8ND24 703 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 TRIM58Q8NG06 486 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 RAPGEF5Q92565 580 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 FRAT1Q92837 279 aaPredicted RBP3.5□□□□□ -1.85
TTC3-214ENST00000472398 NCLNQ969V3 563 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 TRIM43Q96BQ3 446 aaPredicted RBP3.5□□□□□ -1.85
TTC3-214ENST00000472398 CCDC74BQ96LY2 380 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 TMEM74Q96NL1 305 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 TTC1Q99614 292 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 ZCWPW1Q9H0M4 648 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 OR10A4Q9H209 315 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 MAGEH1Q9H213 219 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 WDR6Q9NNW5 1121 aaKnown RBP3.5□□□□□ -1.85
TTC3-214ENST00000472398 NMRK2Q9NPI5 230 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 DMRT3Q9NQL9 472 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 DNAJB9Q9UBS3 223 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 MOSPD1Q9UJG1 213 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 CARD8Q9Y2G2 431 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 C15orf41Q9Y2V0 281 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 CAB39Q9Y376 341 aaPredicted RBP3.5□□□□□ -1.85
TTC3-214ENST00000472398 SPEF1Q9Y4P9 236 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 MAP3K19Q56UN5 1328 aa3.5□□□□□ -1.85
TTC3-214ENST00000472398 SMARCA2P51531 1590 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 LTBP3Q9NS15 1303 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 TTLL8A6PVC2 850 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 UBE2CO00762 179 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 AXIN1O15169 862 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 PROM1O43490 865 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 PRPSAP2O60256 369 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 YEATS4O95619 227 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 CYP3A4P08684 503 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 TPM1P09493 284 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 BMP2P12643 396 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 CIITAP33076 1130 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 RECQLP46063 649 aaPredicted RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 CDR1P51861 262 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 EIF6P56537 245 aaKnown RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 HTD2P86397 168 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 GRIK3Q13003 919 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 USP39Q53GS9 565 aaKnown RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 TBCELQ5QJ74 424 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 IFIT1BQ5T764 474 aaKnown RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 IER5Q5VY09 327 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 OLFML2BQ68BL8 750 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 CREB3L3Q68CJ9 461 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 DCLRE1AQ6PJP8 1040 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 ZNF574Q6ZN55 896 aaPredicted RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 RAB11FIP2Q7L804 512 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 LYSMD3Q7Z3D4 306 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 FGD2Q7Z6J4 655 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 CACNA2D3Q8IZS8 1091 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 PPM1KQ8N3J5 372 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 EFHBQ8N7U6 833 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 GOLM1Q8NBJ4 401 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 LILRB4Q8NHJ6 448 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 CDC26Q8NHZ8 85 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 CTCFLQ8NI51 663 aaPredicted RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 TUBGCP3Q96CW5 907 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 MAELQ96JY0 434 aaKnown RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 SPATA17Q96L03 361 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 ATP6V1G3Q96LB4 118 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 FERD3LQ96RJ6 166 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 RSRP1Q9BUV0 290 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 SPATA9Q9BWV2 254 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.49□□□□□ -1.85
TTC3-214ENST00000472398 SERHL2Q9H4I8 314 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 TM9SF3Q9HD45 589 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 SEMA3GQ9NS98 782 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 ANO10Q9NW15 660 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 OGFRQ9NZT2 677 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 ORC3Q9UBD5 711 aaPredicted RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 SALL4Q9UJQ4 1053 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 GIT1Q9Y2X7 761 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 KDRP35968 1356 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 GOLGA6L7A0A1B0GV03 622 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 DCDC2CA8MYV0 355 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 EIF3CLB5ME19 914 aaKnown RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 KRIT1O00522 736 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 AP3D1O14617 1153 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 PLD2O14939 933 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 MAN1A2O60476 641 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 ATP6V1G1O75348 118 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 PLATP00750 562 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 MYCLP12524 364 aaPredicted RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 RPL13P26373 211 aaKnown RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 PRKAR1BP31321 381 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 MC4RP32245 332 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 CARD18P57730 90 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 HNRNPUQ00839 825 aaKnown RBP eCLIP3.49□□□□□ -1.85
TTC3-214ENST00000472398 LIPEQ05469 1076 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 MAP7Q14244 749 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 RBBP5Q15291 538 aaKnown RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 CNGA2Q16280 664 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 HIF1AQ16665 826 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 TSTQ16762 297 aaKnown RBP3.49□□□□□ -1.85
TTC3-214ENST00000472398 FUT11Q495W5 492 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 SEZ6Q53EL9 994 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 HSP90AA4PQ58FG1 418 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 IGSF11Q5DX21 431 aa3.49□□□□□ -1.85
TTC3-214ENST00000472398 FAM47CQ5HY64 1035 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms