RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	MCF2	P10911	925 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PIK3CA	P42336	1068 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	KIF11	P52732	1056 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	KRT83	P78385	493 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	CYP27A1	Q02318	531 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	SPA17	Q15506	151 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	MAP3K21	Q5TCX8	1036 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TDRD10	Q5VZ19	366 aa	Known RBP	11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	KIAA1328	Q86T90	577 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PPM1K	Q8N3J5	372 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	KLHDC9	Q8NEP7	349 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PXYLP1	Q8TE99	480 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	EIF3C	Q99613	913 aa	Known RBP	11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PI4K2A	Q9BTU6	479 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	HAUS4	Q9H6D7	363 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	RPF1	Q9H9Y2	349 aa	Known RBP	11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	SAGE1	Q9NXZ1	904 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267	THSD7B	Q9C0I4	1608 aa		11.64	□□□□□ -0.55
MRPS18B-208	ENST00000472267		F8VZ95	297 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	RBAK-RBAKDN	I3L0D1	243 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	HLA-DRA	P01903	254 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	C4BPA	P04003	597 aa	Known RBP	11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	STAG3L1	P0CL83	205 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	CXCL8	P10145	99 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	DARS	P14868	501 aa	Known RBP	11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	FER	P16591	822 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	RFX1	P22670	979 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	SOX5	P35711	763 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	USP8	P40818	1118 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	NKX3-2	P78367	333 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	CLDN10	P78369	228 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	NCBP1	Q09161	790 aa	Known RBP	11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	ZACN	Q401N2	412 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	ARHGAP29	Q52LW3	1261 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	GDF6	Q6KF10	455 aa	Predicted RBP	11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	IRF2BP2	Q7Z5L9	587 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TMEM192	Q8IY95	271 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	SLAIN1	Q8ND83	568 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	OR5B17	Q8NGF7	314 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	KAT5	Q92993	513 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	NT5C1B	Q96P26	610 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	ADPGK	Q9BRR6	497 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	BEGAIN	Q9BUH8	593 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	GTF2IRD1	Q9UHL9	959 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TFR2	Q9UP52	801 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	COQ4	Q9Y3A0	265 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TRIM17	Q9Y577	477 aa		11.63	□□□□□ -0.55
MRPS18B-208	ENST00000472267	ANK1	P16157	1881 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	SSU72P8	A0A1W2PR75	194 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	FOXN3	O00409	490 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	NPTXR	O95502	500 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	HOXC8	P31273	242 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	GRK4	P32298	578 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	MFAP3	P55082	362 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TFAM	Q00059	246 aa	Known RBP	11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	GFPT1	Q06210	699 aa	Predicted RBP	11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	SURF1	Q15526	300 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	WDR44	Q5JSH3	913 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	SYT10	Q6XYQ8	523 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	C15orf39	Q6ZRI6	1047 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	RNF180	Q86T96	592 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	NME8	Q8N427	588 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PCSK9	Q8NBP7	692 aa	Known RBP	11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TATDN2	Q93075	761 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	GPR88	Q9GZN0	384 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	DAAM1	Q9Y4D1	1078 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PTCH2	Q9Y6C5	1203 aa		11.62	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PCNT	O95613	3336 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267		A0A1B0GUA9	196 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267		M0QZ92	97 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	KIF2A	O00139	706 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	ZNF263	O14978	683 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	EVI5	O60447	810 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	VNN1	O95497	513 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	CLTA	P09496	248 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	EIF4B	P23588	611 aa	Known RBP	11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	CST5	P28325	142 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PRMT2	P55345	433 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	GNG11	P61952	73 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PTK2	Q05397	1052 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	SNX17	Q15036	470 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	ASTE1	Q2TB18	679 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TAF2	Q6P1X5	1199 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	WDR49	Q8IV35	697 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	JAKMIP2	Q96AA8	810 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	KREMEN1	Q96MU8	473 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	MTMR12	Q9C0I1	747 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	HMX1	Q9NP08	348 aa	Predicted RBP	11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	C1orf112	Q9NSG2	853 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TRIM10	Q9UDY6	481 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	PCDHA13	Q9Y5I0	950 aa		11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	BZW2	Q9Y6E2	419 aa	Known RBP	11.61	□□□□□ -0.55
MRPS18B-208	ENST00000472267	LACTBL1	A8MY62	500 aa		11.6	□□□□□ -0.55
MRPS18B-208	ENST00000472267	IL18RAP	O95256	599 aa		11.6	□□□□□ -0.55
MRPS18B-208	ENST00000472267	ABL1	P00519	1130 aa		11.6	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TNNC2	P02585	160 aa		11.6	□□□□□ -0.55
MRPS18B-208	ENST00000472267	TMEM191B	P0C7N4	346 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms