RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PHOSPHO2Q8TCD6 241 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 LPPQ93052 612 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 TOP1MTQ969P6 601 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 CCDC127Q96BQ5 260 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 FAM193BQ96PV7 902 aaPredicted RBP18.3■□□□□ 0.52
CCM2-205ENST00000472223 SLC9A7Q96T83 725 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 FANCLQ9NW38 375 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 KLK14Q9P0G3 267 aa18.3■□□□□ 0.52
CCM2-205ENST00000472223 EEF1GP26641 437 aaKnown RBP18.29■□□□□ 0.52
CCM2-205ENST00000472223 CASP4P49662 377 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 VAMP7P51809 220 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 AP3M2P53677 418 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 EPHB4P54760 987 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 RNASELQ05823 741 aaKnown RBP18.29■□□□□ 0.52
CCM2-205ENST00000472223 ENPEPQ07075 957 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 PSMD6Q15008 389 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 ENOX2Q16206 610 aaKnown RBP18.29■□□□□ 0.52
CCM2-205ENST00000472223 CRELD2Q6UXH1 353 aaPredicted RBP18.29■□□□□ 0.52
CCM2-205ENST00000472223 LRRC55Q6ZSA7 311 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 ZNF598Q86UK7 904 aaKnown RBP18.29■□□□□ 0.52
CCM2-205ENST00000472223 NT5DC4Q86YG4 428 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 CNOT6LQ96LI5 555 aaKnown RBP18.29■□□□□ 0.52
CCM2-205ENST00000472223 RNPC3Q96LT9 517 aaKnown RBP18.29■□□□□ 0.52
CCM2-205ENST00000472223 MFSD14AQ96MC6 490 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 MRPL9Q9BYD2 267 aaKnown RBP18.29■□□□□ 0.52
CCM2-205ENST00000472223 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 SLC38A7Q9NVC3 462 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 INPP5FQ9Y2H2 1132 aa18.29■□□□□ 0.52
CCM2-205ENST00000472223 TTC3P53804 2025 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 ARL5CA6NH57 179 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 LACTBL1A8MY62 500 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 KCNJ18B7U540 433 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 FAM189A1O60320 539 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 TNNC2P02585 160 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 THP07101 528 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 DLATP10515 647 aaKnown RBP18.28■□□□□ 0.52
CCM2-205ENST00000472223 MLH1P40692 756 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 BFSP1Q12934 665 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 KCNJ12Q14500 433 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 SLC10A6Q3KNW5 377 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 DCAF17Q5H9S7 520 aaPredicted RBP18.28■□□□□ 0.52
CCM2-205ENST00000472223 ZBTB41Q5SVQ8 909 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 LUZP1Q86V48 1076 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 DHX40Q8IX18 779 aaKnown RBP18.28■□□□□ 0.52
CCM2-205ENST00000472223 TMEM192Q8IY95 271 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 TMC2Q8TDI7 906 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 VWCEQ96DN2 955 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 KIF12Q96FN5 646 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 ANKRD36BP1Q96IX9 119 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 SNX27Q96L92 541 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 GAD1Q99259 594 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 SAMSN1Q9NSI8 373 aaKnown RBP18.28■□□□□ 0.52
CCM2-205ENST00000472223 DERAQ9Y315 318 aa18.28■□□□□ 0.52
CCM2-205ENST00000472223 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCM2-205ENST00000472223 TTC26A0AVF1 554 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 PES1O00541 588 aaKnown RBP18.27■□□□□ 0.52
CCM2-205ENST00000472223 OFD1O75665 1012 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 TMEM191BP0C7N4 346 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.52
CCM2-205ENST00000472223 ATP2A2P16615 1042 aaKnown RBP18.27■□□□□ 0.52
CCM2-205ENST00000472223 CETN1Q12798 172 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 TMEM132DQ14C87 1099 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 IQCB1Q15051 598 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 DUOXA2Q1HG44 320 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 HSP90AA4PQ58FG1 418 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 NOMO2Q5JPE7 1267 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 FAM117BQ6P1L5 589 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 RNF214Q8ND24 703 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 ZSWIM2Q8NEG5 633 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 HELQQ8TDG4 1101 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 MED15Q96RN5 788 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 YME1L1Q96TA2 773 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 TMEM117Q9H0C3 514 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 PDE11AQ9HCR9 933 aa18.27■□□□□ 0.52
CCM2-205ENST00000472223 TBKBP1A7MCY6 615 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 PHACTR2O75167 634 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 FGFR1P11362 822 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 KCNE1P15382 129 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 ATF7P17544 494 aaPredicted RBP18.26■□□□□ 0.51
CCM2-205ENST00000472223 MARSP56192 900 aaKnown RBP18.26■□□□□ 0.51
CCM2-205ENST00000472223 DEFB103AP81534 67 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 TFAMQ00059 246 aaKnown RBP18.26■□□□□ 0.51
CCM2-205ENST00000472223 FILIP1LQ4L180 1135 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 TCP11X2Q5H9J9 407 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 WDR49Q8IV35 697 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 BEST2Q8NFU1 509 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 PARD3BQ8TEW8 1205 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 GDF15Q99988 308 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 CNTN3Q9P232 1028 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 PCDH10Q9P2E7 1040 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 UBQLN1Q9UMX0 589 aaKnown RBP18.26■□□□□ 0.51
CCM2-205ENST00000472223 C2CD2Q9Y426 696 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 INSL6Q9Y581 213 aa18.26■□□□□ 0.51
CCM2-205ENST00000472223 SMIM28A0A1B0GU29 152 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 CARNS1A5YM72 827 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 N4BP1O75113 896 aaKnown RBP18.25■□□□□ 0.51
CCM2-205ENST00000472223 DGKIO75912 1065 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 SERPINC1P01008 464 aa18.25■□□□□ 0.51
CCM2-205ENST00000472223 POMCP01189 267 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms