RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 DAPK3O43293 454 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 SPOPO43791 374 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 ZEB2O60315 1214 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 C4BPAP04003 597 aaKnown RBP11.4□□□□□ -0.58
APLF-204ENST00000471727 MMEP08473 750 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 DLATP10515 647 aaKnown RBP11.4□□□□□ -0.58
APLF-204ENST00000471727 COMTP21964 271 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 TBXAS1P24557 533 aaPredicted RBP11.4□□□□□ -0.58
APLF-204ENST00000471727 FNTAP49354 379 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 ALDH5A1P51649 535 aaPredicted RBP11.4□□□□□ -0.58
APLF-204ENST00000471727 EFNA5P52803 228 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 GRM1Q13255 1194 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 MESDQ14696 234 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 CYP1B1Q16678 543 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 TAS1R3Q7RTX0 852 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 TRMT1LQ7Z2T5 733 aaKnown RBP11.4□□□□□ -0.58
APLF-204ENST00000471727 VCPIP1Q96JH7 1222 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 FMO2Q99518 471 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 GGA3Q9NZ52 723 aa11.4□□□□□ -0.58
APLF-204ENST00000471727 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.59
APLF-204ENST00000471727 ZNF541Q9H0D2 1346 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 PPFIA2O75334 1257 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 USP2O75604 605 aaPredicted RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 KRT5P13647 590 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 TNNI1P19237 187 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 EDNRBP24530 442 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 MAN1A1P33908 653 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 CDR1P51861 262 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 SURF1Q15526 300 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 PTPROQ16827 1216 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 CEP85LQ5SZL2 805 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 LIN9Q5TKA1 542 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 ZPBP2Q6X784 338 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.39□□□□□ -0.59
APLF-204ENST00000471727 CYFIP1Q7L576 1253 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 SPATS2Q86XZ4 545 aaKnown RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 C12orf50Q8NA57 414 aaPredicted RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 TCP11Q8WWU5 503 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 ALG3Q92685 438 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 MAGOHBQ96A72 148 aaKnown RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 POP1Q99575 1024 aaKnown RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 JPH2Q9BR39 696 aaPredicted RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 PPP1R1BQ9UD71 204 aaPredicted RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 CNOT8Q9UFF9 292 aaKnown RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 MTRF1LQ9UGC7 380 aaKnown RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 FEZ2Q9UHY8 353 aaPredicted RBP11.39□□□□□ -0.59
APLF-204ENST00000471727 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.39□□□□□ -0.59
APLF-204ENST00000471727 PARP14Q460N5 1801 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 RLFQ13129 1914 aa11.39□□□□□ -0.59
APLF-204ENST00000471727 LOC102724159A0A0B4J2E5 919 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 H0YGN5 161 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 GRIN3BO60391 1043 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 SLC25A27O95847 323 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 HLA-DRAP01903 254 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 KRT14P02533 472 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 UNGP13051 313 aaPredicted RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 NR1D1P20393 614 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 GLRA2P23416 452 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 GNGT1P63211 74 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 PTP4A2Q12974 167 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 PWP2Q15269 919 aaKnown RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 TARBP2Q15633 366 aaKnown RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 DNAJC21Q5F1R6 531 aaKnown RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 SYDE1Q6ZW31 735 aaPredicted RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 TMC3Q7Z5M5 1100 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 SLC13A5Q86YT5 568 aaPredicted RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 JAMLQ86YT9 394 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 MCOLN2Q8IZK6 566 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 TRPM4Q8TD43 1214 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 SEPT1Q8WYJ6 367 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 TATDN2Q93075 761 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 CEP89Q96ST8 783 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 CGRRF1Q99675 332 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 HOMER3Q9NSC5 361 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 CSADQ9Y600 493 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 NFS1Q9Y697 457 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 A0A0B4J269 797 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 ADCY3O60266 1144 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 MAFO75444 373 aaPredicted RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 CYP1A1P04798 512 aaPredicted RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 ATP4AP20648 1035 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 MAPK4P31152 587 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 PIK3CAP42336 1068 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 PTGIRP43119 386 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 STAT5BP51692 787 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 CENPCQ03188 943 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 DHX9Q08211 1270 aaKnown RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 ZNF211Q13398 564 aaPredicted RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 SLMAPQ14BN4 828 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 TRADDQ15628 312 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 IER5Q5VY09 327 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 DDX42Q86XP3 938 aaKnown RBP eCLIP11.38□□□□□ -0.59
APLF-204ENST00000471727 PRELID2Q8N945 189 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 ZNF516Q92618 1163 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 SLCO2A1Q92959 643 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 LRRC19Q9H756 370 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 MRPL47Q9HD33 250 aaKnown RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 TOPORSQ9NS56 1045 aaPredicted RBP11.38□□□□□ -0.59
APLF-204ENST00000471727 RBAKQ9NYW8 714 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms