RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 BRCA2P51587 3418 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 CCDC196A0A1B0GTZ2 297 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 A0A1W2PQC6 194 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 TMEM82A0PJX8 343 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 ERVV-1B6SEH8 477 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 TNFRSF10CO14798 259 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 PRPF3O43395 683 aaKnown RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 PDE8BO95263 885 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 DEXIO95424 95 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 MSL3P1P0C860 447 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 PCP11498 1178 aaKnown RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 PRLRP16471 622 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 GNAT2P19087 354 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 MARCKSP29966 332 aaPredicted RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 ADORA1P30542 326 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 POLR2BP30876 1174 aaKnown RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 HOXA7P31268 230 aaPredicted RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 ACTN2P35609 894 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 MCAMP43121 646 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 GNG11P61952 73 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 CDK17Q00537 523 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 AMPD2Q01433 879 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 CLCQ05315 142 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 ITIH3Q06033 890 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 SSRP1Q08945 709 aaKnown RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 TRIM14Q14142 442 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 SEC23AQ15436 765 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 WHAMMP3Q1A5X7 153 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 LONRF2Q1L5Z9 754 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 CCDC57Q2TAC2 916 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 CFAP100Q494V2 611 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 TTC39AQ5SRH9 613 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 AKNAD1Q5T1N1 836 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 EMC10Q5UCC4 262 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 TTLL7Q6ZT98 887 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 TOGARAM2Q6ZUX3 1019 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 CHST3Q7LGC8 479 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 ZNF572Q7Z3I7 529 aaPredicted RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 RALYLQ86SE5 291 aaKnown RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 TBC1D10CQ8IV04 446 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 IFNL3Q8IZI9 196 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 TTLL11Q8NHH1 800 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 STAG1Q8WVM7 1258 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 RUBCNQ92622 972 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 KISS1RQ969F8 398 aaPredicted RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 SMARCE1Q969G3 411 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 CCDC34Q96HJ3 373 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 EAF1Q96JC9 268 aaPredicted RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 RPGRIP1Q96KN7 1286 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 ZNF747Q9BV97 191 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 CDADC1Q9BWV3 514 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 RNF26Q9BY78 433 aaPredicted RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 GBP3Q9H0R5 595 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 MED4Q9NPJ6 270 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 ST7Q9NRC1 585 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 GJB4Q9NTQ9 266 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 MTMR10Q9NXD2 777 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 RAI14Q9P0K7 980 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 FEZ2Q9UHY8 353 aaPredicted RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 HS3ST3A1Q9Y663 406 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 PMF1-BGLAPU3KQ54 211 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 ATRXP46100 2492 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 MYH7BA7E2Y1 1941 aa4.05□□□□□ -1.76
CSMD2-208ENST00000471438 COL5A2P05997 1499 aaPredicted RBP4.05□□□□□ -1.76
CSMD2-208ENST00000471438 SCN7AQ01118 1682 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 LAMA3Q16787 3333 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 MROH5Q6ZUA9 1318 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 A0A1W2PQ45 241 aaPredicted RBP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 A0A1W2PQY0 241 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 TARSL2A2RTX5 802 aaKnown RBP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 SH3D21A4FU49 640 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 GSG1L2A8MUP6 293 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 BTBD18B2RXH4 712 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 MEIS1O00470 390 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 PSMD14O00487 310 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 PLA2G1BP04054 148 aaKnown RBP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 MYL1P05976 194 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 IVLP07476 585 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 IMPDH2P12268 514 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 NME1P15531 152 aaKnown RBP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 DPEP1P16444 411 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 PDE6AP16499 860 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 MCM3P25205 808 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 OAS2P29728 719 aaKnown RBP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 ARHGAP25P42331 645 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 PIP4K2AP48426 406 aaPredicted RBP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 TRAPPC10P48553 1259 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 ZC3H6P61129 1189 aaKnown RBP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 TGFB2P61812 414 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 ST5P78524 1137 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 CYP4F8P98187 520 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 SPAG1Q07617 926 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 RBL2Q08999 1139 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 KLF10Q13118 480 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 IFIT5Q13325 482 aaKnown RBP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 AUHQ13825 339 aaKnown RBP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 TRIM29Q14134 588 aa4.04□□□□□ -1.76
CSMD2-208ENST00000471438 SAFBQ15424 915 aaKnown RBP eCLIP4.04□□□□□ -1.76
CSMD2-208ENST00000471438 PKN2Q16513 984 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms