RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 TDRD10Q5VZ19 366 aaKnown RBP28.05■■■□□ 2.08
U2AF1-208ENST00000471250 CDR2LQ86X02 465 aaPredicted RBP28.05■■■□□ 2.08
U2AF1-208ENST00000471250 NT5C1BQ96P26 610 aa28.05■■■□□ 2.08
U2AF1-208ENST00000471250 ABL1P00519 1130 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 HMGCRP04035 888 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 PNMA6AP0CW24 399 aaPredicted RBP28.04■■■□□ 2.08
U2AF1-208ENST00000471250 GNG11P61952 73 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 ZNF200P98182 395 aaPredicted RBP28.04■■■□□ 2.08
U2AF1-208ENST00000471250 PTK2Q05397 1052 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 GFPT1Q06210 699 aaPredicted RBP28.04■■■□□ 2.08
U2AF1-208ENST00000471250 ENOX2Q16206 610 aaKnown RBP28.04■■■□□ 2.08
U2AF1-208ENST00000471250 ZNF571Q7Z3V5 609 aaPredicted RBP28.04■■■□□ 2.08
U2AF1-208ENST00000471250 THNSL1Q8IYQ7 743 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 HELQQ8TDG4 1101 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 JAKMIP2Q96AA8 810 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 XPNPEP3Q9NQH7 507 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 DNAI1Q9UI46 699 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 SCN10AQ9Y5Y9 1956 aa28.04■■■□□ 2.08
U2AF1-208ENST00000471250 EVI5O60447 810 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 ERLIN2O94905 339 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 CCDC172P0C7W6 258 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 SLC18A3Q16572 532 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 MAP3K21Q5TCX8 1036 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 WDR49Q8IV35 697 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 DNAJB3Q8WWF6 145 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 CPB2Q96IY4 423 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 FAM84AQ96KN4 292 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 TRIP12Q14669 1992 aaPredicted RBP28.03■■■□□ 2.08
U2AF1-208ENST00000471250 FOXN3O00409 490 aaPredicted RBP28.03■■■□□ 2.08
U2AF1-208ENST00000471250 KIF5CO60282 957 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 HLA-DRAP01903 254 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 MAGEA1P43355 309 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 MFAP3P55082 362 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 POU5F1Q01860 360 aaKnown RBP28.03■■■□□ 2.08
U2AF1-208ENST00000471250 TMEM62Q0P6H9 643 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 KLHDC9Q8NEP7 349 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 ERO1AQ96HE7 468 aa28.03■■■□□ 2.08
U2AF1-208ENST00000471250 IFIH1Q9BYX4 1025 aaKnown RBP28.03■■■□□ 2.08
U2AF1-208ENST00000471250 RCCD1A6NED2 376 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 VNN1O95497 513 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 HTRA3P83110 453 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 BIRC3Q13489 604 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 PCBP1Q15365 356 aaKnown RBP eCLIP28.02■■■□□ 2.08
U2AF1-208ENST00000471250 CXCL17Q6UXB2 119 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 PPM1KQ8N3J5 372 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 NME8Q8N427 588 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 CEP120Q8N960 986 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 OR5B17Q8NGF7 314 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 RAET1EQ8TD07 263 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 PXYLP1Q8TE99 480 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 KREMEN1Q96MU8 473 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 IRX2Q9BZI1 471 aaPredicted RBP28.02■■■□□ 2.08
U2AF1-208ENST00000471250 CDHR5Q9HBB8 845 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 MYO1AQ9UBC5 1043 aa28.02■■■□□ 2.08
U2AF1-208ENST00000471250 A0A1B0GUA9 196 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 KRT86O43790 486 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 KYAT1Q16773 422 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 CCDC122Q5T0U0 273 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 ZNF710Q8N1W2 664 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 KAT5Q92993 513 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 FAM81BQ96LP2 452 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.01■■■□□ 2.07
U2AF1-208ENST00000471250 TSGA10Q9BZW7 698 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 LACRTQ9GZZ8 138 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 TFR2Q9UP52 801 aa28.01■■■□□ 2.07
U2AF1-208ENST00000471250 A0A087X0T9 212 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 FAM228BP0C875 321 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 DARSP14868 501 aaKnown RBP28■■■□□ 2.07
U2AF1-208ENST00000471250 CST5P28325 142 aaPredicted RBP28■■■□□ 2.07
U2AF1-208ENST00000471250 PIK3CAP42336 1068 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 NBPF20Q3BBV1 942 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 TXLNBQ8N3L3 684 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 TATDN2Q93075 761 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 WDR24Q96S15 920 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 OSMRQ99650 979 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 RPF1Q9H9Y2 349 aaKnown RBP28■■■□□ 2.07
U2AF1-208ENST00000471250 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28■■■□□ 2.07
U2AF1-208ENST00000471250 TRIM10Q9UDY6 481 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 ADAMTS1Q9UHI8 967 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 ANK1P16157 1881 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 B4GALT4O60513 344 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 FKTNO75072 461 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 IL18RAPO95256 599 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 CLTAP09496 248 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 WDR44Q5JSH3 913 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 CCSAPQ6IQ19 270 aaPredicted RBP28■■■□□ 2.07
U2AF1-208ENST00000471250 ENOSF1Q7L5Y1 443 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 FAM212AQ96EL1 285 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 PI4K2AQ9BTU6 479 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 SAGE1Q9NXZ1 904 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 GTF2IRD1Q9UHL9 959 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 GUCA1BQ9UMX6 200 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 GINS2Q9Y248 185 aa28■■■□□ 2.07
U2AF1-208ENST00000471250 FANCGO15287 622 aa27.99■■■□□ 2.07
U2AF1-208ENST00000471250 PJA2O43164 708 aa27.99■■■□□ 2.07
U2AF1-208ENST00000471250 STAG3L1P0CL83 205 aa27.99■■■□□ 2.07
U2AF1-208ENST00000471250 FGFR4P22455 802 aa27.99■■■□□ 2.07
U2AF1-208ENST00000471250 OSTNP61366 133 aa27.99■■■□□ 2.07
U2AF1-208ENST00000471250 GCNT1Q02742 428 aa27.99■■■□□ 2.07
U2AF1-208ENST00000471250 KIF5AQ12840 1032 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms