RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 RAD21L1Q9H4I0 556 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 DHX35Q9H5Z1 703 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 IMPAD1Q9NX62 359 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PALD1Q9ULE6 856 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 TMA7Q9Y2S6 64 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 ABCC5O15440 1437 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 CLASP2O75122 1294 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 SCGNO76038 276 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 USP1O94782 785 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 HMBSP08397 361 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 MAGEA9P43362 315 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 FUT11Q495W5 492 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF658Q5TYW1 1059 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 BTBD8Q5XKL5 378 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 TTC13Q8NBP0 860 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PHLPP2Q6ZVD8 1323 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 SFI1A8K8P3 1242 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PODXLO00592 558 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 KRT16P08779 473 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 GTF2E2P29084 291 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 MAPKAPK2P49137 400 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 NCKAP1LP55160 1127 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 C16orf89Q6UX73 402 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 SLC44A2Q8IWA5 706 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 WDR36Q8NI36 951 aaKnown RBP7.25□□□□□ -1.25
BRCA1-210ENST00000471181 THTPAQ9BU02 230 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 WDR11Q9BZH6 1224 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 VIPAS39Q9H9C1 493 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 LATS2Q9NRM7 1088 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 EMILIN3Q9NT22 766 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 LMBRD1Q9NUN5 540 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 CYP39A1Q9NYL5 469 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PCDHB8Q9UN66 801 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 PPIP5K1Q6PFW1 1433 aa7.25□□□□□ -1.25
BRCA1-210ENST00000471181 GCC2Q8IWJ2 1684 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 PRG4Q92954 1404 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ABCC12Q96J65 1359 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 A0A087X0T9 212 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 TRIM43BA6NCK2 446 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 SDC4P31431 198 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 GRIK1P39086 918 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 PHKA1P46020 1223 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 HSPA2P54652 639 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 NRG3P56975 720 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ARHGEF7Q14155 803 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 UBE2SQ16763 222 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 CCSAPQ6IQ19 270 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 LAYNQ6UX15 382 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 BEST2Q8NFU1 509 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 PGBD4Q96DM1 585 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 DSCC1Q9BVC3 393 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 NEUROD4Q9HD90 331 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ZFATQ9P243 1243 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 MYO5CQ9NQX4 1742 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ADGRF5Q8IZF2 1346 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 CFAP99D6REC4 459 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF500O60304 480 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ALDH1A1P00352 501 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ADD1P35611 737 aaKnown RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 PEX3P56589 373 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 DPYDQ12882 1025 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 VEPH1Q14D04 833 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 KLHL17Q6TDP4 642 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 TMEM270Q6UE05 265 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 MACC1Q6ZN28 852 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 LRRC71Q8N4P6 559 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 C18orf25Q96B23 403 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 CCDC134Q9H6E4 229 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 RNF14Q9UBS8 474 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ADAM30Q9UKF2 790 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 CDYLQ9Y232 598 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 COQ6Q9Y2Z9 468 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 MAST1Q9Y2H9 1570 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 TCOF1Q13428 1488 aaKnown RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 K7ERI5 159 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 AIM2O14862 343 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 PGK2P07205 417 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 SLC30A9Q6PML9 568 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 NLRP14Q86W24 1093 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 IZUMO1Q8IYV9 350 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ASAP3Q8TDY4 903 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 EXOC4Q96A65 974 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ADI1Q9BV57 179 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 BABAM1Q9NWV8 329 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 TMEM63CQ9P1W3 806 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 IPPQ9Y573 584 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 MED23Q9ULK4 1368 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 TRIM24O15164 1050 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 TSPAN9O75954 239 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 POTEIP0CG38 1075 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 HPGDP15428 266 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 PLA2G4AP47712 749 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 SULT1E1P49888 294 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 HNRNPH2P55795 449 aaKnown RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 VSNL1P62760 191 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 PPP2R2AP63151 447 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 TNFAIP2Q03169 654 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 CSTF3Q12996 717 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms