RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ZP2Q05996 745 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 SMC1AQ14683 1233 aaKnown RBP19.28■□□□□ 0.68
MRPL28-208ENST00000469744 TMEM132AQ24JP5 1023 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 FAM193BQ96PV7 902 aaPredicted RBP19.28■□□□□ 0.68
MRPL28-208ENST00000469744 RUSC1Q9BVN2 902 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 XPO4Q9C0E2 1151 aaKnown RBP19.28■□□□□ 0.68
MRPL28-208ENST00000469744 FZD8Q9H461 694 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 PRMT7Q9NVM4 692 aaPredicted RBP19.28■□□□□ 0.68
MRPL28-208ENST00000469744 MIOSQ9NXC5 875 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 KLK14Q9P0G3 267 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 PYCARDQ9ULZ3 195 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 DNM3Q9UQ16 869 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 STK24Q9Y6E0 443 aa19.28■□□□□ 0.68
MRPL28-208ENST00000469744 A0A1B0GUA9 196 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 C2orf71A6NGG8 1288 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 EYA4O95677 639 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 SMAD2Q15796 467 aaKnown RBP19.27■□□□□ 0.67
MRPL28-208ENST00000469744 LRRC8AQ8IWT6 810 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 MRPL43Q8N983 215 aaKnown RBP19.27■□□□□ 0.67
MRPL28-208ENST00000469744 SMRP1Q8NCR6 262 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 CACTINQ8WUQ7 758 aaKnown RBP19.27■□□□□ 0.67
MRPL28-208ENST00000469744 CDCA3Q99618 268 aaPredicted RBP19.27■□□□□ 0.67
MRPL28-208ENST00000469744 APOL5Q9BWW9 433 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 CCDC113Q9H0I3 377 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 ZBP1Q9H171 429 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 C2orf40Q9H1Z8 148 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 PDZD7Q9H5P4 517 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 UBN1Q9NPG3 1134 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 RMND1Q9NWS8 449 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 KANSL3Q9P2N6 904 aa19.27■□□□□ 0.67
MRPL28-208ENST00000469744 PRG3Q9Y2Y8 225 aaPredicted RBP19.27■□□□□ 0.67
MRPL28-208ENST00000469744 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.26■□□□□ 0.67
MRPL28-208ENST00000469744 CXCL14O95715 111 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 COASYQ13057 564 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 PRPF4BQ13523 1007 aaKnown RBP19.26■□□□□ 0.67
MRPL28-208ENST00000469744 KCNC3Q14003 757 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 PPP2R5AQ15172 486 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 MAPK6Q16659 721 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 FAM187BQ17R55 369 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 DDX53Q86TM3 631 aaKnown RBP19.26■□□□□ 0.67
MRPL28-208ENST00000469744 GRAMD1CQ8IYS0 662 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 CCDC150Q8NCX0 1101 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 KIFAP3Q92845 792 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 IFT74Q96LB3 600 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 PRIMPOLQ96LW4 560 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 PNMA5Q96PV4 448 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 PARP2Q9UGN5 583 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 FAN1Q9Y2M0 1017 aa19.26■□□□□ 0.67
MRPL28-208ENST00000469744 USP15Q9Y4E8 981 aaPredicted RBP19.26■□□□□ 0.67
MRPL28-208ENST00000469744 F8W810 466 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 NRP1O14786 923 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 HIP1RO75146 1068 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 SSBP05455 408 aaKnown RBP eCLIP19.25■□□□□ 0.67
MRPL28-208ENST00000469744 ZNF18P17022 549 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 AFMP43652 599 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 OR1G1P47890 313 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 RAD51AP2Q09MP3 1159 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 ADHFE1Q8IWW8 467 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 DAW1Q8N136 415 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 GIT1Q9Y2X7 761 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 MYH11P35749 1972 aa19.25■□□□□ 0.67
MRPL28-208ENST00000469744 INPPL1O15357 1258 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 ALDH2P05091 517 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 UBA7P41226 1012 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 PEX3P56589 373 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 UBASH3AP57075 661 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 EEF1DP3Q658K8 133 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 RINT1Q6NUQ1 792 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 COLGALT2Q8IYK4 626 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 HACE1Q8IYU2 909 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 RABGGTAQ92696 567 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 TMEM175Q9BSA9 504 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 GTPBP4Q9BZE4 634 aaKnown RBP19.24■□□□□ 0.67
MRPL28-208ENST00000469744 KCND1Q9NSA2 647 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 FANCLQ9NW38 375 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 MARCH5Q9NX47 278 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 CACNG4Q9UBN1 327 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 PRKAG3Q9UGI9 489 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 HCFC2Q9Y5Z7 792 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 TRIOO75962 3097 aa19.24■□□□□ 0.67
MRPL28-208ENST00000469744 CCDC169A6NNP5 214 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 ACKR2O00590 384 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 N4BP3O15049 544 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 CLASP2O75122 1294 aaKnown RBP19.23■□□□□ 0.67
MRPL28-208ENST00000469744 CTSAP10619 480 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 STAT6P42226 847 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 DSC1Q08554 894 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 MAPK7Q13164 816 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 CUL4BQ13620 913 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 SPATA1Q5VX52 437 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 RRAGBQ5VZM2 374 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 GSTCDQ8NEC7 633 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 NAP1L5Q96NT1 182 aaPredicted RBP19.23■□□□□ 0.67
MRPL28-208ENST00000469744 CXCL16Q9H2A7 254 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 CDH22Q9UJ99 828 aa19.23■□□□□ 0.67
MRPL28-208ENST00000469744 CARNS1A5YM72 827 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 SFI1A8K8P3 1242 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 SERPINC1P01008 464 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 TPM2P07951 284 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms