RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 EDN1P05305 212 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 ZNF865P0CJ78 1059 aaPredicted RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 MCF2P10911 925 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 HARSP12081 509 aaKnown RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 AKR1A1P14550 325 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 TCP1P17987 556 aaKnown RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 TNFAIP3P21580 790 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 ACOT2P49753 483 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 LBX1P52954 281 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 NAP1L1P55209 391 aaKnown RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 BPIFB4P59827 614 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 AMPD2Q01433 879 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 NCBP1Q09161 790 aaKnown RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 PCBP1Q15365 356 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 TMEM63BQ5T3F8 832 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 COL13A1Q5TAT6 717 aaPredicted RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 PPP1R2P3Q6NXS1 205 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 CRELD2Q6UXH1 353 aaPredicted RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 TRAPPC11Q7Z392 1133 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 ZNF710Q8N1W2 664 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 U2AF1L4Q8WU68 220 aaKnown RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 LMBR1Q8WVP7 490 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 CTNNBL1Q8WYA6 563 aaPredicted RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 AGPAT1Q99943 283 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 CARD6Q9BX69 1037 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 PDE11AQ9HCR9 933 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 TOPORSQ9NS56 1045 aaPredicted RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 GNEQ9Y223 722 aaKnown RBP10.07□□□□□ -0.8
SMC1A-205ENST00000469129 CAPN6Q9Y6Q1 641 aa10.07□□□□□ -0.8
SMC1A-205ENST00000469129 CTAGE15A4D2H0 777 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 TULP1O00294 542 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 DYNC1LI2O43237 492 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 FAM189A1O60320 539 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 KPNA6O60684 536 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 PHACTR2O75167 634 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ERLIN2O94905 339 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 CLSTN1O94985 981 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ABL1P00519 1130 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 TNNC2P02585 160 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 C4BPAP04003 597 aaKnown RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ATP1A1P05023 1023 aaKnown RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 TMEM191BP0C7N4 346 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 TMEM253P0C7T8 217 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 CTAGE8P0CG41 777 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 PRLRP16471 622 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 CYP2B6P20813 491 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 USP8P40818 1118 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 CHMP4BP1P59074 171 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 TDRD10Q5VZ19 366 aaKnown RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 MFSD14CQ5VZR4 134 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ZBTB33Q86T24 672 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 CTAGE6Q86UF2 777 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ZNF677Q86XU0 584 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 CTAGE4Q8IX94 777 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 FAM71AQ8IYT1 594 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 SYCE1Q8N0S2 351 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 SLC30A5Q8TAD4 765 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 LNX1Q8TBB1 728 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 HELQQ8TDG4 1101 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 UBE2Q2Q8WVN8 375 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 NLRP7Q8WX94 980 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ANKRD7Q92527 254 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 SEMA4DQ92854 862 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ANKRD36BP1Q96IX9 119 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ZBTB45Q96K62 511 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ADPGKQ9BRR6 497 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 SYT11Q9BT88 431 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 HAPLN2Q9GZV7 340 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 PRDM10Q9NQV6 1147 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 SEPT11Q9NVA2 429 aaKnown RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 ARGLU1Q9NWB6 273 aaPredicted RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 CPSF3Q9UKF6 684 aaKnown RBP10.06□□□□□ -0.8
SMC1A-205ENST00000469129 TFR2Q9UP52 801 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 PCDHGC5Q9Y5F6 944 aa10.06□□□□□ -0.8
SMC1A-205ENST00000469129 A0A087WZ62 844 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 SMIM35A0A1B0GVV1 85 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 FOXN3O00409 490 aaPredicted RBP10.05□□□□□ -0.8
SMC1A-205ENST00000469129 DDX3XO00571 662 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMC1A-205ENST00000469129 ABLIM1O14639 778 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 PNMA6AP0CW24 399 aaPredicted RBP10.05□□□□□ -0.8
SMC1A-205ENST00000469129 SMIM10L2AP0DMW4 78 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 SMIM10L2BP0DMW5 78 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 GNAT1P11488 350 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 PSEN2P49810 448 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 YWHAEP62258 255 aaKnown RBP10.05□□□□□ -0.8
SMC1A-205ENST00000469129 NOP14P78316 857 aaKnown RBP10.05□□□□□ -0.8
SMC1A-205ENST00000469129 MFSD10Q14728 455 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 DCAF4L1Q3SXM0 396 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 TEX35Q5T0J7 233 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 NFRKBQ6P4R8 1299 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 GLYCTKQ8IVS8 523 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 RHOT2Q8IXI1 618 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 EPS8L1Q8TE68 723 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 RFFLQ8WZ73 363 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 RABGGTAQ92696 567 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 TAF4BQ92750 862 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 KREMEN1Q96MU8 473 aa10.05□□□□□ -0.8
SMC1A-205ENST00000469129 POP1Q99575 1024 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms