RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 TMX1Q9H3N1 280 aa13.91□□□□□ -0.18
RUNX1-213ENST00000469087 TMEM8AQ9HCN3 771 aa13.91□□□□□ -0.18
RUNX1-213ENST00000469087 CHST12Q9NRB3 414 aa13.91□□□□□ -0.18
RUNX1-213ENST00000469087 SNTG2Q9NY99 539 aa13.91□□□□□ -0.18
RUNX1-213ENST00000469087 GCNT4Q9P109 453 aa13.91□□□□□ -0.18
RUNX1-213ENST00000469087 SQORQ9Y6N5 450 aa13.91□□□□□ -0.18
RUNX1-213ENST00000469087 ANK1P16157 1881 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 MROH7Q68CQ1 1323 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 LACTBL1A8MY62 500 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 P4HA2O15460 535 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 N4BP1O75113 896 aaKnown RBP13.9□□□□□ -0.18
RUNX1-213ENST00000469087 GTF2H1P32780 548 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 MXI1P50539 228 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 GSDMDP57764 484 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 POU5F1Q01860 360 aaKnown RBP13.9□□□□□ -0.18
RUNX1-213ENST00000469087 TLE2Q04725 743 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 GPNMBQ14956 572 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 KYAT1Q16773 422 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 TRIM60Q495X7 471 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 EPC2Q52LR7 807 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 SCARA3Q6AZY7 606 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 TRIM65Q6PJ69 517 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 LRRC8AQ8IWT6 810 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 EHBP1Q8NDI1 1231 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 TOX2Q96NM4 488 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 CGRRF1Q99675 332 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 LSM14BQ9BX40 385 aaKnown RBP13.9□□□□□ -0.18
RUNX1-213ENST00000469087 TRIM6Q9C030 488 aaPredicted RBP13.9□□□□□ -0.18
RUNX1-213ENST00000469087 CXCL16Q9H2A7 254 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 SIX2Q9NPC8 291 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 PLCB1Q9NQ66 1216 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 CAPN11Q9UMQ6 739 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 COQ4Q9Y3A0 265 aa13.9□□□□□ -0.18
RUNX1-213ENST00000469087 KIAA0100Q14667 2235 aaKnown RBP13.9□□□□□ -0.18
RUNX1-213ENST00000469087 AKR1B15C9JRZ8 316 aaPredicted RBP13.89□□□□□ -0.19
RUNX1-213ENST00000469087 TLR3O15455 904 aaKnown RBP13.89□□□□□ -0.19
RUNX1-213ENST00000469087 SELPP16109 830 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 LRMPQ12912 555 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 PAK2Q13177 524 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 BFSP2Q13515 415 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 TRIM14Q14142 442 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 SURF1Q15526 300 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 ZACNQ401N2 412 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 KLHDC7AQ5VTJ3 777 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 TWF2Q6IBS0 349 aaKnown RBP13.89□□□□□ -0.19
RUNX1-213ENST00000469087 LRRC8DQ7L1W4 858 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 APBB1IPQ7Z5R6 666 aaPredicted RBP13.89□□□□□ -0.19
RUNX1-213ENST00000469087 USP38Q8NB14 1042 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 SMG8Q8ND04 991 aaKnown RBP13.89□□□□□ -0.19
RUNX1-213ENST00000469087 NEK11Q8NG66 645 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 TAS1R2Q8TE23 839 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 SEMA4DQ92854 862 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 CCDC51Q96ER9 411 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 KCNF1Q9H3M0 494 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 NXF3Q9H4D5 531 aaKnown RBP13.89□□□□□ -0.19
RUNX1-213ENST00000469087 C11orf49Q9H6J7 331 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 UMODL1Q5DID0 1318 aa13.89□□□□□ -0.19
RUNX1-213ENST00000469087 DCDC2CA8MYV0 355 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 MGEA5O60502 916 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 AKAP5P24588 427 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 KRT9P35527 623 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 CETN1Q12798 172 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 TDRD10Q5VZ19 366 aaKnown RBP13.88□□□□□ -0.19
RUNX1-213ENST00000469087 WDR49Q8IV35 697 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 EFCAB13Q8IY85 973 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 TRIM44Q96DX7 344 aaPredicted RBP13.88□□□□□ -0.19
RUNX1-213ENST00000469087 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
RUNX1-213ENST00000469087 INTS2Q9H0H0 1204 aaKnown RBP13.88□□□□□ -0.19
RUNX1-213ENST00000469087 GANQ9H2C0 597 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 ASB7Q9H672 318 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 LUC7L2Q9Y383 392 aaKnown RBP13.88□□□□□ -0.19
RUNX1-213ENST00000469087 IPPQ9Y573 584 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 TRIP11Q15643 1979 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 A0A1W2PQJ5 194 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 MFAP3LO75121 409 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 IL18RAPO95256 599 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 VNN1O95497 513 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 CST3P01034 146 aaPredicted RBP13.88□□□□□ -0.19
RUNX1-213ENST00000469087 ZSCAN20P17040 1043 aaPredicted RBP13.88□□□□□ -0.19
RUNX1-213ENST00000469087 POLR2FP61218 127 aaKnown RBP13.88□□□□□ -0.19
RUNX1-213ENST00000469087 DSC3Q14574 896 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 PHLDB3Q6NSJ2 640 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 GJB7Q6PEY0 223 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 ALKAL1Q6UXT8 129 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 FBXL13Q8NEE6 735 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 NLRC4Q9NPP4 1024 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 RAB20Q9NX57 234 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 PCDHB2Q9Y5E7 798 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 CITO14578 2027 aa13.88□□□□□ -0.19
RUNX1-213ENST00000469087 NBNO60934 754 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 NFICP08651 508 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 TPM1P09493 284 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 UCHL3P15374 230 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 TFAMQ00059 246 aaKnown RBP13.87□□□□□ -0.19
RUNX1-213ENST00000469087 DUOXA2Q1HG44 320 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 LRRC26Q2I0M4 334 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 HS1BP3Q53T59 392 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 JADE1Q6IE81 842 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms