RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 ABHD14A-ACY1A0A1B0GW23 586 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 KCNJ18B7U540 433 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 HOXA2O43364 376 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 XPOTO43592 962 aaKnown RBP8.82□□□□□ -1
HDAC6-216ENST00000468949 RECQL4O94761 1208 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 BAIAP3O94812 1187 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 IL18RAPO95256 599 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 TMEM191BP0C7N4 346 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 DLATP10515 647 aaKnown RBP8.82□□□□□ -1
HDAC6-216ENST00000468949 PROZP22891 400 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 EEF1GP26641 437 aaKnown RBP8.82□□□□□ -1
HDAC6-216ENST00000468949 ADSSP30520 456 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 HOXA11P31270 313 aaPredicted RBP8.82□□□□□ -1
HDAC6-216ENST00000468949 CETN1Q12798 172 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 KCNJ12Q14500 433 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 FILIP1LQ4L180 1135 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 ZNF697Q5TEC3 545 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 LRRC55Q6ZSA7 311 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 FILIP1Q7Z7B0 1213 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 CD302Q8IX05 232 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 DHX40Q8IX18 779 aaKnown RBP8.82□□□□□ -1
HDAC6-216ENST00000468949 URGCPQ8TCY9 931 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 ANP32BQ92688 251 aaKnown RBP8.82□□□□□ -1
HDAC6-216ENST00000468949 DUSP9Q99956 384 aaKnown RBP8.82□□□□□ -1
HDAC6-216ENST00000468949 UBN1Q9NPG3 1134 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 RGS18Q9NS28 235 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 FANCLQ9NW38 375 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 SNTG2Q9NY99 539 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 IPPQ9Y573 584 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 PCDHB7Q9Y5E2 793 aa8.82□□□□□ -1
HDAC6-216ENST00000468949 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.82□□□□□ -1
HDAC6-216ENST00000468949 TMEM265A0A087WTH1 108 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 A0A0U1RQF3 1178 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 MAPK13O15264 365 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 CBFA2T2O43439 604 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 MGEA5O60502 916 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 N4BP1O75113 896 aaKnown RBP8.81□□□□□ -1
HDAC6-216ENST00000468949 AKAP3O75969 853 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 TNNC2P02585 160 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 FGBP02675 491 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 CXCL8P10145 99 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 ACRP10323 421 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 TNNI1P19237 187 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 VAMP7P51809 220 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 CYP24A1Q07973 514 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 BFSP1Q12934 665 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 SEZ6Q53EL9 994 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 TCP11X2Q5H9J9 407 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 TMEM240Q5SV17 173 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 FKBP15Q5T1M5 1219 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 RASIP1Q5U651 963 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 FAM109BQ6ICB4 259 aaPredicted RBP8.81□□□□□ -1
HDAC6-216ENST00000468949 GLB1LQ6UWU2 654 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 ZNF365Q70YC5 407 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 FRMD5Q7Z6J6 570 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 ECHDC2Q86YB7 292 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 CBWD2Q8IUF1 395 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 NPAS4Q8IUM7 802 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 BRSK2Q8IWQ3 736 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 DEFB123Q8N688 67 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 CEP120Q8N960 986 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 SP7Q8TDD2 431 aaPredicted RBP8.81□□□□□ -1
HDAC6-216ENST00000468949 HERVK_113Q902F9 699 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 CCDC127Q96BQ5 260 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 DDX27Q96GQ7 796 aaKnown RBP8.81□□□□□ -1
HDAC6-216ENST00000468949 ANKRD36BP1Q96IX9 119 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 TMX1Q9H3N1 280 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 MMRN2Q9H8L6 949 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 RSAD1Q9HA92 442 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 PTPRHQ9HD43 1115 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 SAMSN1Q9NSI8 373 aaKnown RBP8.81□□□□□ -1
HDAC6-216ENST00000468949 INPP5FQ9Y2H2 1132 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 GIT1Q9Y2X7 761 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 HES2Q9Y543 173 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.81□□□□□ -1
HDAC6-216ENST00000468949 SCN5AQ14524 2016 aa8.81□□□□□ -1
HDAC6-216ENST00000468949 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.8□□□□□ -1
HDAC6-216ENST00000468949 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.8□□□□□ -1
HDAC6-216ENST00000468949 ABLIM1O14639 778 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 PHACTR2O75167 634 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 EOMESO95936 686 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 AKAP5P24588 427 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 DNAJB2P25686 324 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 MLH1P40692 756 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 TNFSF9P41273 254 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 CASP4P49662 377 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 TFAMQ00059 246 aaKnown RBP8.8□□□□□ -1
HDAC6-216ENST00000468949 MYL7Q01449 175 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 POU5F1Q01860 360 aaKnown RBP8.8□□□□□ -1
HDAC6-216ENST00000468949 RNASELQ05823 741 aaKnown RBP8.8□□□□□ -1
HDAC6-216ENST00000468949 BIRC3Q13489 604 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 DSC3Q14574 896 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 TMEM132DQ14C87 1099 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 PSMD6Q15008 389 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 IQCB1Q15051 598 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 MAN2A1Q16706 1144 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 UBXN11Q5T124 520 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 C16orf59Q7L2K0 433 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 OTOP2Q7RTS6 562 aa8.8□□□□□ -1
HDAC6-216ENST00000468949 ZC3H3Q8IXZ2 948 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms