RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 EIF3DO15371 548 aaKnown RBP eCLIP16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 ZNF202O95125 648 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 MYBP10242 640 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 ERVFC1P60507 584 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 POU5F1Q01860 360 aaKnown RBP16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 CUL4BQ13620 913 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 SMC1AQ14683 1233 aaKnown RBP16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 FAM26FQ5R3K3 315 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 VPS52Q8N1B4 723 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 HLA-CQ95604 372 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 UROC1Q96N76 676 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 PPP1R10Q96QC0 940 aaKnown RBP16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 CDCA3Q99618 268 aaPredicted RBP16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 TCF25Q9BQ70 676 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 HAPLN2Q9GZV7 340 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 BLZF1Q9H2G9 400 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 CNTN3Q9P232 1028 aa16.14■□□□□ 0.17
TMEM39A-205ENST00000468676 IRS1P35568 1242 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 CASP5P51878 434 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 EHHADHQ08426 723 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 PSMD2Q13200 908 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 AAK1Q2M2I8 961 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 SLC39A4Q6P5W5 647 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 KRBA2Q6ZNG9 492 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 TMEM173Q86WV6 379 aaPredicted RBP16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 CD302Q8IX05 232 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 ATXN2LQ8WWM7 1075 aaKnown RBP16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 POMGNT1Q8WZA1 660 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 CCDC47Q96A33 483 aaKnown RBP16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 DDX27Q96GQ7 796 aaKnown RBP16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 GOLPH3LQ9H4A5 285 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 RPF1Q9H9Y2 349 aaKnown RBP16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 THEGQ9P2T0 379 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 AGO2Q9UKV8 859 aaKnown RBP16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 SSX2IPQ9Y2D8 614 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 PRG3Q9Y2Y8 225 aaPredicted RBP16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 UBE4BO95155 1302 aa16.13■□□□□ 0.17
TMEM39A-205ENST00000468676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 ANKRD63C9JTQ0 380 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 KIAA0391O15091 583 aaKnown RBP16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 FAM189A1O60320 539 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 TADA2AO75478 443 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 CXCL14O95715 111 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 CTSAP10619 480 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 GARTP22102 1010 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 SNRPFP62306 86 aaKnown RBP16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 HYAL1Q12794 435 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 HSP90AA2PQ14568 343 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 COL19A1Q14993 1142 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 NAB2Q15742 525 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 SLC10A6Q3KNW5 377 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 TPRNQ4KMQ1 711 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 PLPP4Q5VZY2 271 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 EPM2AIP1Q7L775 607 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 GRAMD1CQ8IYS0 662 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 MRPL43Q8N983 215 aaKnown RBP16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 ZNF507Q8TCN5 953 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 BCL7CQ8WUZ0 217 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 PABPC5Q96DU9 382 aaKnown RBP16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 TLE6Q9H808 572 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 ADAM28Q9UKQ2 775 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 IRAK3Q9Y616 596 aa16.12■□□□□ 0.17
TMEM39A-205ENST00000468676 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 TTC26A0AVF1 554 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 XPOTO43592 962 aaKnown RBP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 PRPF6O94906 941 aaKnown RBP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 CSPG5O95196 566 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 LDHAP00338 332 aaKnown RBP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 SOD2P04179 222 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 ADRB2P07550 413 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 CXCL8P10145 99 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 CASP1P29466 404 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 RPL9P32969 192 aaKnown RBP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 FAM160A1Q05DH4 1040 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 PPP2R3AQ06190 1150 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 KCNA1Q09470 495 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 ELAVL2Q12926 359 aaKnown RBP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 SEZ6Q53EL9 994 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 GLRA4Q5JXX5 417 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 DCLRE1AQ6PJP8 1040 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 GPR65Q8IYL9 337 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 FMR1NBQ8N0W7 255 aaPredicted RBP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 TMEM87AQ8NBN3 555 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 HPS3Q969F9 1004 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 FGFBP2Q9BYJ0 223 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 ZBP1Q9H171 429 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 CXCL16Q9H2A7 254 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 UBE2ZQ9H832 354 aaPredicted RBP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 MARCH5Q9NX47 278 aa16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 CPSF3Q9UKF6 684 aaKnown RBP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 SF3B1O75533 1304 aaKnown RBP eCLIP16.11■□□□□ 0.17
TMEM39A-205ENST00000468676 A0A0C4DFX4 3053 aa16.1■□□□□ 0.17
TMEM39A-205ENST00000468676 PDCD11Q14690 1871 aaKnown RBP16.1■□□□□ 0.17
TMEM39A-205ENST00000468676 C2orf71A6NGG8 1288 aa16.1■□□□□ 0.17
TMEM39A-205ENST00000468676 CASTOR2A6NHX0 329 aa16.1■□□□□ 0.17
TMEM39A-205ENST00000468676 TMEM189-UBE2V1I3L0A0 370 aa16.1■□□□□ 0.17
TMEM39A-205ENST00000468676 KLRC4O43908 158 aa16.1■□□□□ 0.17
TMEM39A-205ENST00000468676 EFEMP2O95967 443 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms