RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TFIP11Q9UBB9 837 aaKnown RBP12.26□□□□□ -0.45
COL4A6-205ENST00000468338 PCDHGC5Q9Y5F6 944 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 IRAK3Q9Y616 596 aa12.26□□□□□ -0.45
COL4A6-205ENST00000468338 NPHP3-ACAD11A0A0J9YXS1 232 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 ACTN4O43707 911 aaKnown RBP12.25□□□□□ -0.45
COL4A6-205ENST00000468338 PPP6R2O75170 966 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 TBX10O75333 385 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 YEATS4O95619 227 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 BRD1O95696 1058 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 GLP2RO95838 553 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 F13A1P00488 732 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 ALDH2P05091 517 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 AKAP5P24588 427 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 SCNN1GP51170 649 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 CEBPZQ03701 1054 aaKnown RBP12.25□□□□□ -0.45
COL4A6-205ENST00000468338 RAD51AP2Q09MP3 1159 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 PKP1Q13835 747 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 GIT2Q14161 759 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 DUSP6Q16828 381 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 DCAF4L1Q3SXM0 396 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 TMEM184AQ6ZMB5 413 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 RNF168Q8IYW5 571 aaPredicted RBP12.25□□□□□ -0.45
COL4A6-205ENST00000468338 MRPL43Q8N983 215 aaKnown RBP12.25□□□□□ -0.45
COL4A6-205ENST00000468338 LARP4BQ92615 738 aaKnown RBP12.25□□□□□ -0.45
COL4A6-205ENST00000468338 TMEM169Q96HH4 297 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 MSLNLQ96KJ4 702 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 FIZ1Q96SL8 496 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 TCF25Q9BQ70 676 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 REEP2Q9BRK0 252 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 ADPGKQ9BRR6 497 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 VN1R3Q9BXE9 311 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 ZBP1Q9H171 429 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 MARCH5Q9NX47 278 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 CLDND1Q9NY35 253 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 LARSQ9P2J5 1176 aaKnown RBP12.25□□□□□ -0.45
COL4A6-205ENST00000468338 STK17AQ9UEE5 414 aa12.25□□□□□ -0.45
COL4A6-205ENST00000468338 FSD2A1L4K1 749 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 HIDE1A8MVS5 230 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 PTGESO14684 152 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 NRP1O14786 923 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 SLC16A4O15374 487 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 LINC01565O15544 149 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 RECQL4O94761 1208 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 HSP90AA1P07900 732 aaKnown RBP12.24□□□□□ -0.45
COL4A6-205ENST00000468338 CTSAP10619 480 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 MAPTP10636 758 aaKnown RBP12.24□□□□□ -0.45
COL4A6-205ENST00000468338 SCP2P22307 547 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 NRIP1P48552 1158 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 SMTNP53814 917 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 NCKAP1LP55160 1127 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 GRIK3Q13003 919 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 NAB2Q15742 525 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 PUS10Q3MIT2 529 aaKnown RBP12.24□□□□□ -0.45
COL4A6-205ENST00000468338 ATL3Q6DD88 541 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 GPBP1Q86WP2 473 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 VN1R2Q8NFZ6 395 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 MICAL1Q8TDZ2 1067 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 ZNF396Q96N95 335 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-205ENST00000468338 FAM193BQ96PV7 902 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-205ENST00000468338 APOL6Q9BWW8 343 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 MRPL4Q9BYD3 311 aaKnown RBP12.24□□□□□ -0.45
COL4A6-205ENST00000468338 TLE6Q9H808 572 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 SNTG2Q9NY99 539 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 CLEC1BQ9P126 229 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 STK39Q9UEW8 545 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 CCDC39Q9UFE4 941 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 FAN1Q9Y2M0 1017 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 MUC3AQ02505 3323 aa12.24□□□□□ -0.45
COL4A6-205ENST00000468338 A0A087X0B3 334 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 C2orf71A6NGG8 1288 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 H0YCG3 227 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 H3BQ06 376 aaPredicted RBP12.23□□□□□ -0.45
COL4A6-205ENST00000468338 SPTLC2O15270 562 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 CSPG5O95196 566 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 LIG1P18858 919 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 COASYQ13057 564 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 SMC1AQ14683 1233 aaKnown RBP12.23□□□□□ -0.45
COL4A6-205ENST00000468338 STK38Q15208 465 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 XKR4Q5GH76 650 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
COL4A6-205ENST00000468338 PLPP4Q5VZY2 271 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 ALKAL1Q6UXT8 129 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 ZPBP2Q6X784 338 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 CCDC73Q6ZRK6 1079 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 TMC7Q7Z402 723 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 VPS52Q8N1B4 723 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 TARS2Q9BW92 718 aaKnown RBP12.23□□□□□ -0.45
COL4A6-205ENST00000468338 GBP3Q9H0R5 595 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 CDT1Q9H211 546 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 CXCL16Q9H2A7 254 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 ST6GALNAC4Q9H4F1 302 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 IGFLR1Q9H665 355 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 PARVGQ9HBI0 331 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 KLK14Q9P0G3 267 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 PARP2Q9UGN5 583 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 ZDHHC9Q9Y397 364 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 CITO14578 2027 aa12.23□□□□□ -0.45
COL4A6-205ENST00000468338 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms