RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 MEFVO15553 781 aaPredicted RBP12.64□□□□□ -0.39
CDHR3-205ENST00000468143 TOM1L1O75674 476 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 KIF4AO95239 1232 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 STAT6P42226 847 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 GLUD2P49448 558 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 ZNF131P52739 623 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 ZC2HC1CQ53FD0 456 aaPredicted RBP12.64□□□□□ -0.39
CDHR3-205ENST00000468143 RARS2Q5T160 578 aaKnown RBP12.64□□□□□ -0.39
CDHR3-205ENST00000468143 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 CEP57Q86XR8 500 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 GLYCTKQ8IVS8 523 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 RNF168Q8IYW5 571 aaPredicted RBP12.64□□□□□ -0.39
CDHR3-205ENST00000468143 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
CDHR3-205ENST00000468143 DDX12PQ92771 950 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 RPGRIP1Q96KN7 1286 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 HAPLN2Q9GZV7 340 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 STK17AQ9UEE5 414 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 STK39Q9UEW8 545 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 PRKAG3Q9UGI9 489 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 TBX20Q9UMR3 447 aa12.64□□□□□ -0.39
CDHR3-205ENST00000468143 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 H0YCG3 227 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 TEX28O15482 410 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 PPP6R2O75170 966 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 BRD1O95696 1058 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 SPATA31D3P0C874 917 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 RPL17P18621 184 aaKnown RBP12.63□□□□□ -0.39
CDHR3-205ENST00000468143 SP100P23497 879 aaPredicted RBP12.63□□□□□ -0.39
CDHR3-205ENST00000468143 LIG4P49917 911 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 CLCN4P51793 760 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 CLCNKBP51801 687 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 DSG1Q02413 1049 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 SOX4Q06945 474 aaPredicted RBP12.63□□□□□ -0.39
CDHR3-205ENST00000468143 SPAG1Q07617 926 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 USP41Q3LFD5 358 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 TPRNQ4KMQ1 711 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 RTP2Q5QGT7 225 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 PRSS55Q6UWB4 352 aaPredicted RBP12.63□□□□□ -0.39
CDHR3-205ENST00000468143 ALKAL1Q6UXT8 129 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 ZPBP2Q6X784 338 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 CCDC73Q6ZRK6 1079 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 SPATA31D4Q6ZUB0 917 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 SFR1Q86XK3 245 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 PALB2Q86YC2 1186 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 STAMQ92783 540 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
CDHR3-205ENST00000468143 PPP1R10Q96QC0 940 aaKnown RBP12.63□□□□□ -0.39
CDHR3-205ENST00000468143 FIZ1Q96SL8 496 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 IKZF4Q9H2S9 585 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 TOPORSQ9NS56 1045 aaPredicted RBP12.63□□□□□ -0.39
CDHR3-205ENST00000468143 CHST7Q9NS84 486 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 TBC1D7Q9P0N9 293 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 SSX2IPQ9Y2D8 614 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 VCANP13611 3396 aa12.63□□□□□ -0.39
CDHR3-205ENST00000468143 CUL9Q8IWT3 2517 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 SPTBN5Q9NRC6 3674 aaKnown RBP12.62□□□□□ -0.39
CDHR3-205ENST00000468143 ANKRD63C9JTQ0 380 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 I3L4J1 428 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 B3GAT3O94766 335 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 HOXB8P17481 243 aaPredicted RBP12.62□□□□□ -0.39
CDHR3-205ENST00000468143 TNFSF9P41273 254 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
CDHR3-205ENST00000468143 MCL1Q07820 350 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 CBX2Q14781 532 aaPredicted RBP12.62□□□□□ -0.39
CDHR3-205ENST00000468143 NOLC1Q14978 699 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDHR3-205ENST00000468143 SLC10A6Q3KNW5 377 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 XKR4Q5GH76 650 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 ZBTB41Q5SVQ8 909 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 DCLRE1AQ6PJP8 1040 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 SHC4Q6S5L8 630 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 TMC5Q6UXY8 1006 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 PPFIBP1Q86W92 1011 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 TMEM130Q8N3G9 435 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 SUSD6Q92537 303 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 C18orf25Q96B23 403 aaPredicted RBP12.62□□□□□ -0.39
CDHR3-205ENST00000468143 CHAMP1Q96JM3 812 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 SNX27Q96L92 541 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 FBXL18Q96ME1 805 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 PHF7Q9BWX1 381 aaPredicted RBP12.62□□□□□ -0.39
CDHR3-205ENST00000468143 ADAM7Q9H2U9 754 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 RXFP1Q9HBX9 757 aa12.62□□□□□ -0.39
CDHR3-205ENST00000468143 MORC2Q9Y6X9 1032 aaPredicted RBP12.62□□□□□ -0.39
CDHR3-205ENST00000468143 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDHR3-205ENST00000468143 TISP43B9A030 160 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 HNRNPDLO14979 420 aaKnown RBP12.61□□□□□ -0.39
CDHR3-205ENST00000468143 YEATS4O95619 227 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 CXCL8P10145 99 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 PDIA4P13667 645 aaKnown RBP12.61□□□□□ -0.39
CDHR3-205ENST00000468143 IDEP14735 1019 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 BRCC3P46736 316 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 GTF2BQ00403 316 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 UPP1Q16831 310 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 CES5AQ6NT32 575 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 CD300LGQ6UXG3 332 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 ZNF720Q7Z2F6 126 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 RNF135Q8IUD6 432 aa12.61□□□□□ -0.39
CDHR3-205ENST00000468143 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms