RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 MED15Q96RN5 788 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 TSPAN18Q96SJ8 248 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 GAD1Q99259 594 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 ZBED2Q9BTP6 218 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 MRPL9Q9BYD2 267 aaKnown RBP16.53■□□□□ 0.24
SNIP1-202ENST00000468040 TMEM117Q9H0C3 514 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 ASB7Q9H672 318 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 KLK14Q9P0G3 267 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 KANSL3Q9P2N6 904 aa16.53■□□□□ 0.24
SNIP1-202ENST00000468040 TTC26A0AVF1 554 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 AKAP3O75969 853 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 ADRB2P07550 413 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 CASP4P49662 377 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 ENPEPQ07075 957 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 CYP24A1Q07973 514 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 XKR4Q5GH76 650 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 NOMO2Q5JPE7 1267 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 ALKAL1Q6UXT8 129 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 CHRDL2Q6WN34 429 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 INTS8Q75QN2 995 aaKnown RBP16.52■□□□□ 0.24
SNIP1-202ENST00000468040 FILIP1Q7Z7B0 1213 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 HELQQ8TDG4 1101 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 EEF2KMTQ96G04 330 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 ZFP42Q96MM3 310 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 YME1L1Q96TA2 773 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 SRRTQ9BXP5 876 aaKnown RBP16.52■□□□□ 0.24
SNIP1-202ENST00000468040 TSPY26PQ9H489 355 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 THAP9Q9H5L6 903 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 METTL14Q9HCE5 456 aaKnown RBP16.52■□□□□ 0.24
SNIP1-202ENST00000468040 RNF19AQ9NV58 838 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 CNTN3Q9P232 1028 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 INPP5FQ9Y2H2 1132 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 INSL6Q9Y581 213 aa16.52■□□□□ 0.24
SNIP1-202ENST00000468040 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.52■□□□□ 0.24
SNIP1-202ENST00000468040 PDE4DIPQ5VU43 2346 aa16.52■□□□□ 0.23
SNIP1-202ENST00000468040 TNRC18O15417 2968 aaPredicted RBP16.51■□□□□ 0.23
SNIP1-202ENST00000468040 RALGAPA2Q2PPJ7 1873 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 IKBKBO14920 756 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 KRT13P13646 458 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 KCNE1P15382 129 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 HTRA4P83105 476 aaPredicted RBP16.51■□□□□ 0.23
SNIP1-202ENST00000468040 GRIK3Q13003 919 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 PSMD6Q15008 389 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 FAM117BQ6P1L5 589 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 TMCO2Q7Z6W1 182 aaPredicted RBP16.51■□□□□ 0.23
SNIP1-202ENST00000468040 FAM114A1Q8IWE2 563 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 CMTR2Q8IYT2 770 aaKnown RBP16.51■□□□□ 0.23
SNIP1-202ENST00000468040 LRRC43Q8N309 656 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 FAM212AQ96EL1 285 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 MFSD14AQ96MC6 490 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 CASD1Q96PB1 797 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 FNBP1Q96RU3 617 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 PRO3102Q9H379 93 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 DERAQ9Y315 318 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 C2CD2Q9Y426 696 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 NFE2L3Q9Y4A8 694 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 CITO14578 2027 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 PTPRSQ13332 1948 aa16.51■□□□□ 0.23
SNIP1-202ENST00000468040 TBKBP1A7MCY6 615 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 SMTNL1A8MU46 457 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 BECN2A8MW95 431 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 LACTBL1A8MY62 500 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 MEFVO15553 781 aaPredicted RBP16.5■□□□□ 0.23
SNIP1-202ENST00000468040 XPOTO43592 962 aaKnown RBP16.5■□□□□ 0.23
SNIP1-202ENST00000468040 TLL1O43897 1013 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 CCDC40Q4G0X9 1142 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 FRMD5Q7Z6J6 570 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 NT5DC4Q86YG4 428 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 AOPEPQ8N6M6 819 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 GSTCDQ8NEC7 633 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 TMC2Q8TDI7 906 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 CCDC127Q96BQ5 260 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 ZNF689Q96CS4 500 aaPredicted RBP16.5■□□□□ 0.23
SNIP1-202ENST00000468040 RAD9AQ99638 391 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 RC3H2Q9HBD1 1191 aaKnown RBP16.5■□□□□ 0.23
SNIP1-202ENST00000468040 SLC38A7Q9NVC3 462 aa16.5■□□□□ 0.23
SNIP1-202ENST00000468040 MAGEC2Q9UBF1 373 aaPredicted RBP16.5■□□□□ 0.23
SNIP1-202ENST00000468040 ARMCX3Q9UH62 379 aaPredicted RBP16.5■□□□□ 0.23
SNIP1-202ENST00000468040 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.49■□□□□ 0.23
SNIP1-202ENST00000468040 SMIM28A0A1B0GU29 152 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.49■□□□□ 0.23
SNIP1-202ENST00000468040 A0A1W2PPC1 479 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 TULP1O00294 542 aaPredicted RBP16.49■□□□□ 0.23
SNIP1-202ENST00000468040 PTGESO14684 152 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 POMCP01189 267 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 THP07101 528 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 GATMP50440 423 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 SCNN1GP51170 649 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 VAMP7P51809 220 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 MARSP56192 900 aaKnown RBP16.49■□□□□ 0.23
SNIP1-202ENST00000468040 RNASELQ05823 741 aaKnown RBP16.49■□□□□ 0.23
SNIP1-202ENST00000468040 BFSP1Q12934 665 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 BTG3Q14201 252 aaPredicted RBP16.49■□□□□ 0.23
SNIP1-202ENST00000468040 TMEM132DQ14C87 1099 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 GLRA4Q5JXX5 417 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 PRPF38BQ5VTL8 546 aaKnown RBP16.49■□□□□ 0.23
SNIP1-202ENST00000468040 WDR49Q8IV35 697 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 FAM200AQ8TCP9 573 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 KIF12Q96FN5 646 aa16.49■□□□□ 0.23
SNIP1-202ENST00000468040 FAM193BQ96PV7 902 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms