RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 RUFY4Q6ZNE9 571 aa20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 THNSL1Q8IYQ7 743 aa20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 TATDN2Q93075 761 aa20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 SCLT1Q96NL6 688 aa20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 NT5C1BQ96P26 610 aa20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 RNF186Q9NXI6 227 aa20.29■□□□□ 0.84
CHRNA4-203ENST00000467563 HTTP42858 3142 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 VNN1O95497 513 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 ZNF410Q86VK4 478 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 CPB2Q96IY4 423 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 SYT11Q9BT88 431 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 TSGA10Q9BZW7 698 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 ADAMTS10Q9H324 1103 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 MACROD2A1Z1Q3 448 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 GPR25O00155 361 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 PJA2O43164 708 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 TRPA1O75762 1119 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 URI1O94763 535 aaPredicted RBP20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 HLA-DRAP01903 254 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 CYP2C9P11712 490 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 ARF4P18085 180 aaPredicted RBP20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 GJA9P57773 515 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 OSTNP61366 133 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 ZNF200P98182 395 aaPredicted RBP20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 CACNB2Q08289 660 aaPredicted RBP20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 BIRC3Q13489 604 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 KIF22Q14807 665 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 PDZD7Q9H5P4 517 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 NENFQ9UMX5 172 aa20.28■□□□□ 0.84
CHRNA4-203ENST00000467563 SMIM35A0A1B0GVV1 85 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 DDX3XO00571 662 aaKnown RBP eCLIP20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 GPR32O75388 356 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 ANXA13P27216 316 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 MFAP3P55082 362 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 FMNL3Q8IVF7 1028 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 TMEM192Q8IY95 271 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 SHC3Q92529 594 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 VTI1AQ96AJ9 217 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 KATNAL1Q9BW62 490 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 PACSIN1Q9BY11 444 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 CDHR5Q9HBB8 845 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 NAGPAQ9UK23 515 aa20.27■□□□□ 0.84
CHRNA4-203ENST00000467563 TREHO43280 583 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 TSPAN1O60635 241 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 PGK1P00558 417 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 ELNP15502 786 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 PIK3CAP42336 1068 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 GNASQ5JWF2 1037 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 SCARA3Q6AZY7 606 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 SRGAP1Q7Z6B7 1085 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 FAM71AQ8IYT1 594 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 LNX1Q8TBB1 728 aaPredicted RBP20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 FAM212AQ96EL1 285 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 CFHR5Q9BXR6 569 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 HDAC6Q9UBN7 1215 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 SALL4Q9UJQ4 1053 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 GINS2Q9Y248 185 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 SEPT4O43236 478 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 ZC3H11AO75152 810 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 CCDC172P0C7W6 258 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 FGFR4P22455 802 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 GTF2F1P35269 517 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 BMS1Q14692 1282 aaKnown RBP20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 WDR49Q8IV35 697 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 SLC30A5Q8TAD4 765 aa20.26■□□□□ 0.83
CHRNA4-203ENST00000467563 NAB2Q15742 525 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 ALKBH5Q6P6C2 394 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 VPS36Q86VN1 386 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 DNAAF5Q86Y56 855 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 GLYCTKQ8IVS8 523 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 DNAJB3Q8WWF6 145 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 SECISBP2LQ93073 1101 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 UPF3AQ9H1J1 476 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 CTAGE9A4FU28 777 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 MCF2P10911 925 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 HOXC8P31273 242 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 USP8P40818 1118 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 GCNT1Q02742 428 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 SPOPLQ6IQ16 392 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 DHX38Q92620 1227 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 MTMR12Q9C0I1 747 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 LUC7LQ9NQ29 371 aaKnown RBP20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 C1orf112Q9NSG2 853 aa20.25■□□□□ 0.83
CHRNA4-203ENST00000467563 C17orf102A2RUQ5 167 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 MEFVO15553 781 aaPredicted RBP20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 ERLIN2O94905 339 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 CXCL8P10145 99 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 CCND3P30281 292 aaPredicted RBP20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 CXCL17Q6UXB2 119 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 C7orf31Q8N865 590 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 ZNF784Q8NCA9 323 aaPredicted RBP20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 CD99L2Q8TCZ2 262 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 SLC20A1Q8WUM9 679 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 OSMRQ99650 979 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 ARID3AQ99856 593 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 APOBEC3GQ9HC16 384 aaKnown RBP20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 CAPN6Q9Y6Q1 641 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 CASP8AP2Q9UKL3 1982 aa20.24■□□□□ 0.83
CHRNA4-203ENST00000467563 A0A1B0GUA9 196 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 CYP26A1O43174 497 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms