RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 EMSYQ7Z589 1322 aa6.41□□□□□ -1.38
PTCD3-207ENST00000467273 LOC730098B7Z3J9 87 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 FOXD2O60548 495 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-207ENST00000467273 BPNT1O95861 308 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 AMHP03971 560 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 RB1P06400 928 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 MYL3P08590 195 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 PDE6AP16499 860 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 AVPR2P30518 371 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 OS9Q13438 667 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-207ENST00000467273 GPM6BQ13491 265 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 GPNMBQ14956 572 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 GK5Q6ZS86 529 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 ARMCX6Q7L4S7 300 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 FAM160B2Q86V87 743 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 GMCL1P1Q8NEA9 526 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 SSH3Q8TE77 659 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 CHURC1Q8WUH1 139 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 SDR42E1Q8WUS8 393 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 PPP2R3CQ969Q6 453 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 MKL1Q969V6 931 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 ANAPC16Q96DE5 110 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 MPHOSPH6Q99547 160 aaKnown RBP6.4□□□□□ -1.38
PTCD3-207ENST00000467273 PDGFCQ9NRA1 345 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 RNF146Q9NTX7 359 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 CYP39A1Q9NYL5 469 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 PCDHA4Q9UN74 947 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 RWDD3Q9Y3V2 267 aa6.4□□□□□ -1.38
PTCD3-207ENST00000467273 DMDP11532 3685 aa6.4□□□□□ -1.39
PTCD3-207ENST00000467273 MICAL3Q7RTP6 2002 aa6.4□□□□□ -1.39
PTCD3-207ENST00000467273 NLRC5Q86WI3 1866 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 BAZ2AQ9UIF9 1905 aaKnown RBP6.39□□□□□ -1.39
PTCD3-207ENST00000467273 MYH4Q9Y623 1939 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 TRIP12Q14669 1992 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-207ENST00000467273 TCRBV5S4A2TA0A5A2 114 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 FSD2A1L4K1 749 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 C5orf67F2Z3F1 127 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 NBNO60934 754 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 CYP2D6P10635 497 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 CKBP12277 381 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 NTF4P34130 210 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 ZNF165P49910 485 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 STAT2P52630 851 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 CLCQ05315 142 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 SCARA3Q6AZY7 606 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 EP400NLQ6ZTU2 488 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 ASCL5Q7RTU5 278 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 FBXO16Q8IX29 292 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-207ENST00000467273 TMEM192Q8IY95 271 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 LRRC47Q8N1G4 583 aaKnown RBP6.39□□□□□ -1.39
PTCD3-207ENST00000467273 LCORLQ8N3X6 602 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 OR6J1Q8NGC5 347 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 SCFD2Q8WU76 684 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 NKD2Q969F2 451 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-207ENST00000467273 SHDQ96IW2 340 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 FERD3LQ96RJ6 166 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 CTAGE1Q96RT6 745 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 NUP88Q99567 741 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-207ENST00000467273 C11orf84Q9BUA3 381 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-207ENST00000467273 ANTXR1Q9H6X2 564 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 ZNF287Q9HBT7 754 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 HOMER2Q9NSB8 354 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 FAM86C1Q9NVL1 165 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 ARPP21Q9UBL0 812 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-207ENST00000467273 CD207Q9UJ71 328 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 PNMA2Q9UL42 364 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 POLR3KQ9Y2Y1 108 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-207ENST00000467273 ZBED9Q6R2W3 1325 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 ZNF532Q9HCE3 1301 aa6.39□□□□□ -1.39
PTCD3-207ENST00000467273 FRYLO94915 3013 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 B4DLN1 442 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 SURF6O75683 361 aaKnown RBP6.38□□□□□ -1.39
PTCD3-207ENST00000467273 ICAM3P32942 547 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 HK2P52789 917 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 MRPL12P52815 198 aaKnown RBP6.38□□□□□ -1.39
PTCD3-207ENST00000467273 VCPP55072 806 aaKnown RBP6.38□□□□□ -1.39
PTCD3-207ENST00000467273 ERVFC1P60507 584 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 SLFN5Q08AF3 891 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 HYAL1Q12794 435 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 COASYQ13057 564 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 INPP5AQ14642 412 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 PPP2R5BQ15173 497 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 SBK1Q52WX2 424 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 FBXW10Q5XX13 1052 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 DIEXFQ68CQ4 756 aaKnown RBP6.38□□□□□ -1.39
PTCD3-207ENST00000467273 GIMAP6Q6P9H5 292 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 DBX2Q6ZNG2 339 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 ANKS3Q6ZW76 656 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 TMCO2Q7Z6W1 182 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-207ENST00000467273 C12orf40Q86WS4 652 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 CKAP2LQ8IYA6 745 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 EXOC8Q8IYI6 725 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 REXO1Q8N1G1 1221 aaKnown RBP6.38□□□□□ -1.39
PTCD3-207ENST00000467273 SMRP1Q8NCR6 262 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 TOP1MTQ969P6 601 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 EAF2Q96CJ1 260 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-207ENST00000467273 MSLNLQ96KJ4 702 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 YME1L1Q96TA2 773 aa6.38□□□□□ -1.39
PTCD3-207ENST00000467273 KATNAL1Q9BW62 490 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms