RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 KCNG1Q9UIX4 513 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 MAP3K2Q9Y2U5 619 aa4.28□□□□□ -1.72
GTF3C3-209ENST00000466862 KIAA0355O15063 1070 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 SNRPA1P09661 255 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 IL12RB1P42701 662 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 AVPR1BP47901 424 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 BLOC1S1P78537 153 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 CDK17Q00537 523 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 STRN3Q13033 797 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 ABHD17BQ5VST6 288 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 DRC7Q8IY82 874 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 CMTR2Q8IYT2 770 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 GPR156Q8NFN8 814 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 FBXO18Q8NFZ0 1043 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 RIOX1Q9H6W3 641 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 FAM30AQ9NZY2 134 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 ZNHIT2Q9UHR6 403 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 SIK3Q9Y2K2 1263 aa4.27□□□□□ -1.73
GTF3C3-209ENST00000466862 MAST3O60307 1309 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 AKR1B10O60218 316 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 CDKL5O76039 1030 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 EYA4O95677 639 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 HKR1P10072 659 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 GCSHP23434 173 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 ECHS1P30084 290 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 ALDH1A3P47895 512 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 SLC6A9P48067 706 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 USP14P54578 494 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 CCT2P78371 535 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 ANO4Q32M45 955 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 GJC2Q5T442 439 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 AFMIDQ63HM1 303 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 LHFPL2Q6ZUX7 228 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 NOP9Q86U38 636 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 UBR7Q8N806 425 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 SUPT20HQ8NEM7 779 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 TGFBRAP1Q8WUH2 860 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 FUBP3Q96I24 572 aaKnown RBP eCLIP4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 IFT122Q9HBG6 1241 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 CCM2LQ9NUG4 571 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 POGKQ9P215 609 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 SLC23A1Q9UHI7 598 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 COX11Q9Y6N1 276 aa4.26□□□□□ -1.73
GTF3C3-209ENST00000466862 FPR1P21462 350 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 ADSLP30566 484 aaPredicted RBP4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 PTPN7P35236 360 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 MPLP40238 635 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 MCAMP43121 646 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 MTNR1BP49286 362 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 C21orf58P58505 322 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 SRSF2Q01130 221 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 MGAT2Q10469 447 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 RESTQ13127 1097 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 STAT4Q14765 748 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 SEPT2Q15019 361 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 LRCH2Q5VUJ6 765 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 OTUD7BQ6GQQ9 843 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 ARMC6Q6NXE6 501 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 DDX46Q7L014 1031 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 GPR149Q86SP6 731 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 MAPKAPK5Q8IW41 473 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 LCORLQ8N3X6 602 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 SIMC1Q8NDZ2 872 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 ZSWIM1Q9BR11 485 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 MRI1Q9BV20 369 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 GREM2Q9H772 168 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 CAAP1Q9H8G2 361 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 LANCL2Q9NS86 450 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 RBM12Q9NTZ6 932 aaKnown RBP4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 TMEM74BQ9NUR3 256 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 PTGFRNQ9P2B2 879 aa4.25□□□□□ -1.73
GTF3C3-209ENST00000466862 MGST3O14880 152 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 BRINP1O60477 761 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 PRSS23O95084 383 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 ESRRBO95718 433 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 HLA-DOAP06340 250 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 VIL1P09327 827 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 ITGAMP11215 1152 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 FDXRP22570 491 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 PCSK1P29120 753 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 GPR3P46089 330 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 RAP2BP61225 183 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 ERVK-21P61565 698 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 MALLQ13021 153 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 RRP12Q5JTH9 1297 aaKnown RBP4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 TOR2AQ5JU69 321 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 SYCE2Q6PIF2 218 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 SEM1Q6ZVN7 128 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 RD3Q7Z3Z2 195 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 TMEM132CQ8N3T6 1108 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 OR2I1PQ8NGU4 316 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 CASKIN2Q8WXE0 1202 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 ACE2Q9BYF1 805 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 FBXO34Q9NWN3 711 aa4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 COL11A2P13942 1736 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-209ENST00000466862 SALL3Q9BXA9 1300 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 A0A1B0GTW7 788 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 K7ESF4 209 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 PRKD3O94806 890 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 ZFPL1O95159 310 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms