RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 SIK3Q9Y2K2 1263 aa5.2□□□□□ -1.58
CALD1-214ENST00000466704 LUC7L2Q9Y383 392 aaKnown RBP5.2□□□□□ -1.58
CALD1-214ENST00000466704 PCDHA13Q9Y5I0 950 aa5.2□□□□□ -1.58
CALD1-214ENST00000466704 MYBBP1AQ9BQG0 1328 aaKnown RBP5.2□□□□□ -1.58
CALD1-214ENST00000466704 NESP48681 1621 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 CCDC154A6NI56 674 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 HTRA2O43464 458 aaPredicted RBP5.19□□□□□ -1.58
CALD1-214ENST00000466704 RECQL4O94761 1208 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 IL33O95760 270 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 AMHP03971 560 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 CT47B1P0C2W7 299 aaPredicted RBP5.19□□□□□ -1.58
CALD1-214ENST00000466704 ALOX15P16050 662 aaPredicted RBP5.19□□□□□ -1.58
CALD1-214ENST00000466704 ATP5JP18859 108 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 FPR1P21462 350 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 WASP42768 502 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 SLC6A9P48067 706 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 FOXE3Q13461 319 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 ATP2B3Q16720 1220 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 BMT2Q1RMZ1 405 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 NAIF1Q69YI7 327 aaPredicted RBP5.19□□□□□ -1.58
CALD1-214ENST00000466704 PPP4R3AQ6IN85 833 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 HTR3DQ70Z44 454 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 GPRIN1Q7Z2K8 1008 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 GGNQ86UU5 652 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 RNF169Q8NCN4 708 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 OR10H5Q8NGA6 315 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 SLC35B2Q8TB61 432 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 STAG1Q8WVM7 1258 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 CASKIN2Q8WXE0 1202 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 COA7Q96BR5 231 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 PHACTR3Q96KR7 559 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 MRI1Q9BV20 369 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 KCNH6Q9H252 994 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 SORCS3Q9UPU3 1222 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 ACTL7AQ9Y615 435 aa5.19□□□□□ -1.58
CALD1-214ENST00000466704 PLSCR1O15162 318 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 FAM20BO75063 409 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 SCAF4O95104 1147 aaKnown RBP5.18□□□□□ -1.58
CALD1-214ENST00000466704 RPLP2P05387 115 aaKnown RBP5.18□□□□□ -1.58
CALD1-214ENST00000466704 C1SP09871 688 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 DDCP20711 480 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 ALDH1A3P47895 512 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 CREMQ03060 361 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 TTF1Q15361 905 aaPredicted RBP5.18□□□□□ -1.58
CALD1-214ENST00000466704 C3orf36Q3SXR2 165 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 RABL3Q5HYI8 236 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 TMEM240Q5SV17 173 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 ANKRD13AQ8IZ07 590 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 CPT1CQ8TCG5 803 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 RAB24Q969Q5 203 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 HOOK2Q96ED9 719 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 TMX3Q96JJ7 454 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 NDC1Q9BTX1 674 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 CEP72Q9P209 647 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 IP6K2Q9UHH9 426 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 SERPINB13Q9UIV8 391 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 LIMCH1Q9UPQ0 1083 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 RUVBL1Q9Y265 456 aaKnown RBP5.18□□□□□ -1.58
CALD1-214ENST00000466704 CCDC88BA6NC98 1476 aa5.18□□□□□ -1.58
CALD1-214ENST00000466704 ATRNL1Q5VV63 1379 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 PDS5BQ9NTI5 1447 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 DTNBO60941 627 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 AMY1AP04745 511 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 TNFRSF1AP19438 455 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 PCSK1P29120 753 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 APOBEC3AP31941 199 aaPredicted RBP5.17□□□□□ -1.58
CALD1-214ENST00000466704 DGCR2P98153 550 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 CDC42EP1Q00587 391 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 IL10RAQ13651 578 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 LSM12Q3MHD2 195 aaKnown RBP5.17□□□□□ -1.58
CALD1-214ENST00000466704 MIIPQ5JXC2 388 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 DRICH1Q6PGQ1 229 aaPredicted RBP5.17□□□□□ -1.58
CALD1-214ENST00000466704 DRC7Q8IY82 874 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 CMTR2Q8IYT2 770 aaKnown RBP5.17□□□□□ -1.58
CALD1-214ENST00000466704 CPA6Q8N4T0 437 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 ZGPATQ8N5A5 531 aaKnown RBP5.17□□□□□ -1.58
CALD1-214ENST00000466704 HSPBAP1Q96EW2 488 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 ZNF503Q96F45 646 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 DCLRE1CQ96SD1 692 aaKnown RBP5.17□□□□□ -1.58
CALD1-214ENST00000466704 ZNF703Q9H7S9 590 aaPredicted RBP5.17□□□□□ -1.58
CALD1-214ENST00000466704 TRPM5Q9NZQ8 1165 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 IPPQ9Y573 584 aa5.17□□□□□ -1.58
CALD1-214ENST00000466704 TRIM24O15164 1050 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 SGTAO43765 313 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 ZRANB2O95218 330 aaKnown RBP eCLIP5.16□□□□□ -1.58
CALD1-214ENST00000466704 POMCP01189 267 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 VCAM1P19320 739 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 EDNRBP24530 442 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 NHLH2Q02577 135 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 MTM1Q13496 603 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 TUBA3CQ13748 450 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 TOB2Q14106 344 aaPredicted RBP5.16□□□□□ -1.58
CALD1-214ENST00000466704 ODR4Q5SWX8 454 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 OTUD7BQ6GQQ9 843 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 ZNF529Q6P280 563 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 TUBA3EQ6PEY2 450 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 GADL1Q6ZQY3 521 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 KAT5Q92993 513 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 ZNF747Q9BV97 191 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 REXO4Q9GZR2 422 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms