RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 FLCNQ8NFG4 579 aa21.08■□□□□ 0.97
COL9A3-206ENST00000466532 PIK3R5Q8WYR1 880 aa21.08■□□□□ 0.97
COL9A3-206ENST00000466532 MYADMQ96S97 322 aa21.08■□□□□ 0.97
COL9A3-206ENST00000466532 EPS15L1Q9UBC2 864 aa21.08■□□□□ 0.97
COL9A3-206ENST00000466532 DAXXQ9UER7 740 aaPredicted RBP21.08■□□□□ 0.97
COL9A3-206ENST00000466532 PHLPP2Q6ZVD8 1323 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 CCDC169A6NNP5 214 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 PP2D1A8MPX8 630 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 LAD1O00515 517 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 ZMYND10O75800 440 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 CLCN5P51795 746 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 PEX3P56589 373 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 ELAVL2Q12926 359 aaKnown RBP21.07■□□□□ 0.96
COL9A3-206ENST00000466532 GLRA4Q5JXX5 417 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 KRT79Q5XKE5 535 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 APBB1IPQ7Z5R6 666 aaPredicted RBP21.07■□□□□ 0.96
COL9A3-206ENST00000466532 LNX1Q8TBB1 728 aaPredicted RBP21.07■□□□□ 0.96
COL9A3-206ENST00000466532 RSAD2Q8WXG1 361 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 CLSTN3Q9BQT9 956 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 FBXW11Q9UKB1 542 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 FBXL21Q9UKT6 434 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 DNM3Q9UQ16 869 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 TNFSF13BQ9Y275 285 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 USP34Q70CQ2 3546 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 CACNA1HO95180 2353 aa21.07■□□□□ 0.96
COL9A3-206ENST00000466532 NOTCH4Q99466 2003 aa21.06■□□□□ 0.96
COL9A3-206ENST00000466532 NARSO43776 548 aaKnown RBP21.06■□□□□ 0.96
COL9A3-206ENST00000466532 CWF19L1Q69YN2 538 aaKnown RBP21.06■□□□□ 0.96
COL9A3-206ENST00000466532 DTHD1Q6ZMT9 781 aa21.06■□□□□ 0.96
COL9A3-206ENST00000466532 GET4Q7L5D6 327 aaPredicted RBP21.06■□□□□ 0.96
COL9A3-206ENST00000466532 PPP1R10Q96QC0 940 aaKnown RBP21.06■□□□□ 0.96
COL9A3-206ENST00000466532 HIP1RO75146 1068 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 CDC25AP30304 524 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 PRPHP41219 470 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 NPTX2P47972 431 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 DMP1Q13316 513 aaPredicted RBP21.05■□□□□ 0.96
COL9A3-206ENST00000466532 IL17AQ16552 155 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 LIN9Q5TKA1 542 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 MCTP1Q6DN14 999 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 PDXDC1Q6P996 788 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.05■□□□□ 0.96
COL9A3-206ENST00000466532 SIX5Q8N196 739 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.05■□□□□ 0.96
COL9A3-206ENST00000466532 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL9A3-206ENST00000466532 KIF3AQ9Y496 699 aa21.05■□□□□ 0.96
COL9A3-206ENST00000466532 TMEM189-UBE2V1I3L0A0 370 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 B3GAT3O94766 335 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 CFHP08603 1231 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 NPR3P17342 541 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 CLCNKBP51801 687 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 RABEP1Q15276 862 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 ZNF568Q3ZCX4 644 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 DAW1Q8N136 415 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 CEP120Q8N960 986 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 DRC1Q96MC2 740 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 ACO2Q99798 780 aaKnown RBP21.04■□□□□ 0.96
COL9A3-206ENST00000466532 RUSC1Q9BVN2 902 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 MRPL4Q9BYD3 311 aaKnown RBP21.04■□□□□ 0.96
COL9A3-206ENST00000466532 TMEM134Q9H6X4 195 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 KMT5AQ9NQR1 393 aa21.04■□□□□ 0.96
COL9A3-206ENST00000466532 ADAM12O43184 909 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 HNRNPA1P09651 372 aaKnown RBP eCLIP21.03■□□□□ 0.96
COL9A3-206ENST00000466532 LAMP2P13473 410 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 AOC1P19801 751 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 GRM5P41594 1212 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 YARSP54577 528 aaKnown RBP21.03■□□□□ 0.96
COL9A3-206ENST00000466532 OSTNP61366 133 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 PPM1LQ5SGD2 360 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 RINT1Q6NUQ1 792 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 DCLRE1AQ6PJP8 1040 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 KCNK18Q7Z418 384 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 SLC44A3Q8N4M1 653 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 NXPE3Q969Y0 559 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 UROC1Q96N76 676 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 MMTAG2Q9BU76 263 aaKnown RBP21.03■□□□□ 0.96
COL9A3-206ENST00000466532 CCDC94Q9BW85 323 aaPredicted RBP21.03■□□□□ 0.96
COL9A3-206ENST00000466532 CDT1Q9H211 546 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 GOLGA2P5Q9HBQ8 144 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 TOPORSQ9NS56 1045 aaPredicted RBP21.03■□□□□ 0.96
COL9A3-206ENST00000466532 ARHGAP28Q9P2N2 729 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 MIA3Q5JRA6 1907 aa21.03■□□□□ 0.96
COL9A3-206ENST00000466532 SMIM28A0A1B0GU29 152 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 PI15O43692 258 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 ST18O60284 1047 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 GFRA3O60609 400 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 C8AP07357 584 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 FGFR3P22607 806 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 FSHRP23945 695 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 IGFBP6P24592 240 aaPredicted RBP21.02■□□□□ 0.96
COL9A3-206ENST00000466532 MAPK7Q13164 816 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 ZRSR1Q15695 479 aaKnown RBP21.02■□□□□ 0.96
COL9A3-206ENST00000466532 RILPL1Q5EBL4 403 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 C1orf186Q6ZWK4 172 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 TAS1R3Q7RTX0 852 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 GRASPQ7Z6J2 395 aaPredicted RBP21.02■□□□□ 0.96
COL9A3-206ENST00000466532 TARS2Q9BW92 718 aaKnown RBP21.02■□□□□ 0.96
COL9A3-206ENST00000466532 WNT16Q9UBV4 365 aa21.02■□□□□ 0.96
COL9A3-206ENST00000466532 CENPBP07199 599 aaPredicted RBP21.01■□□□□ 0.95
COL9A3-206ENST00000466532 SRFP11831 508 aa21.01■□□□□ 0.95
COL9A3-206ENST00000466532 OR1D2P34982 312 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms