RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 BICD1Q96G01 975 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 MRPL4Q9BYD3 311 aaKnown RBP10.87□□□□□ -0.67
PMF1-204ENST00000466489 PRO3102Q9H379 93 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 MRPL44Q9H9J2 332 aaKnown RBP10.87□□□□□ -0.67
PMF1-204ENST00000466489 RGS18Q9NS28 235 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 PANK4Q9NVE7 773 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 MSRAQ9UJ68 235 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 EXOC7Q9UPT5 735 aa10.87□□□□□ -0.67
PMF1-204ENST00000466489 CNTNAP2Q9UHC6 1331 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 PVALEFA0A1B0GWK0 134 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 LGALS16A8MUM7 142 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 PPP1R3GB7ZBB8 358 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 ACKR2O00590 384 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 ENPP3O14638 875 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 SLC16A4O15374 487 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 TLL1O43897 1013 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 CSDE1O75534 798 aaKnown RBP10.86□□□□□ -0.67
PMF1-204ENST00000466489 GNA14O95837 355 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 IBSPP21815 317 aaPredicted RBP10.86□□□□□ -0.67
PMF1-204ENST00000466489 FGFR4P22455 802 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 SMAD3P84022 425 aaKnown RBP10.86□□□□□ -0.67
PMF1-204ENST00000466489 LRIT3Q3SXY7 679 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 PPP4R3CPQ6ZMV5 832 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 HAUS6Q7Z4H7 955 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 HERC6Q8IVU3 1022 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 DAW1Q8N136 415 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 MSANTD4Q8NCY6 345 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 GOLGA5Q8TBA6 731 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 HVCN1Q96D96 273 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 YME1L1Q96TA2 773 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 C7orf25Q9BPX7 421 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 NTPCRQ9BSD7 190 aaKnown RBP10.86□□□□□ -0.67
PMF1-204ENST00000466489 TRIM9Q9C026 710 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 ELAC1Q9H777 363 aaKnown RBP10.86□□□□□ -0.67
PMF1-204ENST00000466489 MINDY3Q9H8M7 445 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 POLD4Q9HCU8 107 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 OLFML3Q9NRN5 406 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 EXOC1Q9NV70 894 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 CXXC1Q9P0U4 656 aaPredicted RBP10.86□□□□□ -0.67
PMF1-204ENST00000466489 ARHGAP28Q9P2N2 729 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 CAPN11Q9UMQ6 739 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 INSL6Q9Y581 213 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 PCDHB13Q9Y5F0 798 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 EPN1Q9Y6I3 576 aaPredicted RBP10.86□□□□□ -0.67
PMF1-204ENST00000466489 PTPRSQ13332 1948 aa10.86□□□□□ -0.67
PMF1-204ENST00000466489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.85□□□□□ -0.67
PMF1-204ENST00000466489 KCNJ18B7U540 433 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 HNRNPDLO14979 420 aaKnown RBP10.85□□□□□ -0.67
PMF1-204ENST00000466489 TSPAN1O60635 241 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 RHOBTB3O94955 611 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 UPP2O95045 317 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 GJB5O95377 273 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 GCNT3O95395 438 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 EOMESO95936 686 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 BMP6P22004 513 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 MATR3P43243 847 aaKnown RBP eCLIP10.85□□□□□ -0.671e-6■■■□□ 15
PMF1-204ENST00000466489 LIG4P49917 911 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 NCKAP1LP55160 1127 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 DEFB103AP81534 67 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 ZBED6P86452 979 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 UBXN1Q04323 297 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 KIF5AQ12840 1032 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 KCNJ12Q14500 433 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 DCAF4L1Q3SXM0 396 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 GLE1Q53GS7 698 aaKnown RBP10.85□□□□□ -0.67
PMF1-204ENST00000466489 SLC27A1Q6PCB7 646 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 UNC13DQ70J99 1090 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 SFR1Q86XK3 245 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 RNF169Q8NCN4 708 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 TRIM58Q8NG06 486 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 LRRC15Q8TF66 581 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 STAMQ92783 540 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 TOP1MTQ969P6 601 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 VWCEQ96DN2 955 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 DNAJC7Q99615 494 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 TCHPQ9BT92 498 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 KIFC3Q9BVG8 833 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 TRAIPQ9BWF2 469 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 PARD6BQ9BYG5 372 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 FZD8Q9H461 694 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 UBN1Q9NPG3 1134 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 ABHD10Q9NUJ1 306 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 FAM105AQ9NUU6 356 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 TMEM161AQ9NX61 479 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 MYO6Q9UM54 1294 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 PCDHA11Q9Y5I1 949 aa10.85□□□□□ -0.67
PMF1-204ENST00000466489 CITO14578 2027 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 A0A0U1RQF3 1178 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 A0A1B0GUA9 196 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.84□□□□□ -0.67
PMF1-204ENST00000466489 FRMD3A2A2Y4 597 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 CARNS1A5YM72 827 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 C9IYK1 514 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 ARF4P18085 180 aaPredicted RBP10.84□□□□□ -0.67
PMF1-204ENST00000466489 ANXA13P27216 316 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 KRT9P35527 623 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 COPB1P53618 953 aaKnown RBP10.84□□□□□ -0.67
PMF1-204ENST00000466489 LRRC63Q05C16 580 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 SLC20A2Q08357 652 aa10.84□□□□□ -0.67
PMF1-204ENST00000466489 COASYQ13057 564 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms