RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TADA2AO75478 443 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 BRD1O95696 1058 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 ALADP13716 330 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 NCKAP1LP55160 1127 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 ITIH3Q06033 890 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 RTP2Q5QGT7 225 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 MPZL3Q6UWV2 235 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 ALKAL1Q6UXT8 129 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 HAPLN2Q9GZV7 340 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 GOLGA2P5Q9HBQ8 144 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 ODF2LQ9ULJ1 636 aa23.88■■□□□ 1.41
LIME1-203ENST00000465591 MYBP10242 640 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 MCF2P10911 925 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 HARSP12081 509 aaKnown RBP23.87■■□□□ 1.41
LIME1-203ENST00000465591 RPL17P18621 184 aaKnown RBP23.87■■□□□ 1.41
LIME1-203ENST00000465591 SMTNP53814 917 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 SOX4Q06945 474 aaPredicted RBP23.87■■□□□ 1.41
LIME1-203ENST00000465591 USP41Q3LFD5 358 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 SEZ6Q53EL9 994 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 XKR4Q5GH76 650 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 HERC4Q5GLZ8 1057 aaPredicted RBP23.87■■□□□ 1.41
LIME1-203ENST00000465591 KIAA1841Q6NSI8 718 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 CES5AQ6NT32 575 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 CD300LGQ6UXG3 332 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 TMC5Q6UXY8 1006 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 RASSF8Q8NHQ8 419 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 RIN2Q8WYP3 895 aaPredicted RBP23.87■■□□□ 1.41
LIME1-203ENST00000465591 ZMAT2Q96NC0 199 aaKnown RBP23.87■■□□□ 1.41
LIME1-203ENST00000465591 TCHPQ9BT92 498 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 CCDC94Q9BW85 323 aaPredicted RBP23.87■■□□□ 1.41
LIME1-203ENST00000465591 SSX2IPQ9Y2D8 614 aa23.87■■□□□ 1.41
LIME1-203ENST00000465591 SMIM28A0A1B0GU29 152 aa23.86■■□□□ 1.41
LIME1-203ENST00000465591 ZNF131P52739 623 aa23.86■■□□□ 1.41
LIME1-203ENST00000465591 STRN3Q13033 797 aa23.86■■□□□ 1.41
LIME1-203ENST00000465591 PRSS55Q6UWB4 352 aaPredicted RBP23.86■■□□□ 1.41
LIME1-203ENST00000465591 HAUS6Q7Z4H7 955 aa23.86■■□□□ 1.41
LIME1-203ENST00000465591 APBB1IPQ7Z5R6 666 aaPredicted RBP23.86■■□□□ 1.41
LIME1-203ENST00000465591 LARP4BQ92615 738 aaKnown RBP23.86■■□□□ 1.41
LIME1-203ENST00000465591 SNX27Q96L92 541 aa23.86■■□□□ 1.41
LIME1-203ENST00000465591 FIZ1Q96SL8 496 aa23.86■■□□□ 1.41
LIME1-203ENST00000465591 LARSQ9P2J5 1176 aaKnown RBP23.86■■□□□ 1.41
LIME1-203ENST00000465591 ANKFY1Q9P2R3 1169 aa23.86■■□□□ 1.41
LIME1-203ENST00000465591 SF3B1O75533 1304 aaKnown RBP eCLIP23.85■■□□□ 1.41
LIME1-203ENST00000465591 DOCK6Q96HP0 2047 aa23.85■■□□□ 1.41
LIME1-203ENST00000465591 TOM1L1O75674 476 aa23.85■■□□□ 1.41
LIME1-203ENST00000465591 ADH1AP07327 375 aa23.85■■□□□ 1.41
LIME1-203ENST00000465591 CLCNKBP51801 687 aa23.85■■□□□ 1.41
LIME1-203ENST00000465591 GLYCTKQ8IVS8 523 aa23.85■■□□□ 1.41
LIME1-203ENST00000465591 C3orf58Q8NDZ4 430 aa23.85■■□□□ 1.41
LIME1-203ENST00000465591 KCNN1Q92952 543 aa23.85■■□□□ 1.41
LIME1-203ENST00000465591 SFXN1Q9H9B4 322 aa23.85■■□□□ 1.41
LIME1-203ENST00000465591 MAN1C1Q9NR34 630 aa23.85■■□□□ 1.41
LIME1-203ENST00000465591 FAM13AO94988 1023 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 SPATA31D3P0C874 917 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 DDIT3P35638 169 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 MTHFRP42898 656 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 YARSP54577 528 aaKnown RBP23.84■■□□□ 1.41
LIME1-203ENST00000465591 NOLC1Q14978 699 aaKnown RBP eCLIP23.84■■□□□ 1.41
LIME1-203ENST00000465591 SLC39A14Q15043 492 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 FAM171A1Q5VUB5 890 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 ZPBP2Q6X784 338 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 SPATA31D4Q6ZUB0 917 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 GPR149Q86SP6 731 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 PALB2Q86YC2 1186 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 MYCT1Q8N699 235 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 NECTIN4Q96NY8 510 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 ACAP3Q96P50 834 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 ZSCAN16Q9H4T2 348 aaPredicted RBP23.84■■□□□ 1.41
LIME1-203ENST00000465591 PARVGQ9HBI0 331 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 DAXXQ9UER7 740 aaPredicted RBP23.84■■□□□ 1.41
LIME1-203ENST00000465591 KCNG1Q9UIX4 513 aa23.84■■□□□ 1.41
LIME1-203ENST00000465591 C2CD4DB7Z1M9 353 aa23.83■■□□□ 1.41
LIME1-203ENST00000465591 GLUD1P00367 558 aa23.83■■□□□ 1.41
LIME1-203ENST00000465591 MCL1Q07820 350 aa23.83■■□□□ 1.41
LIME1-203ENST00000465591 UPP1Q16831 310 aa23.83■■□□□ 1.41
LIME1-203ENST00000465591 GPR65Q8IYL9 337 aa23.83■■□□□ 1.41
LIME1-203ENST00000465591 TMEM130Q8N3G9 435 aa23.83■■□□□ 1.41
LIME1-203ENST00000465591 RIPOR3Q96MK2 946 aa23.83■■□□□ 1.41
LIME1-203ENST00000465591 TSHZ2Q9NRE2 1034 aa23.83■■□□□ 1.41
LIME1-203ENST00000465591 TOPORSQ9NS56 1045 aaPredicted RBP23.83■■□□□ 1.41
LIME1-203ENST00000465591 FNIP2Q9P278 1114 aa23.83■■□□□ 1.41
LIME1-203ENST00000465591 MORC2Q9Y6X9 1032 aaPredicted RBP23.83■■□□□ 1.41
LIME1-203ENST00000465591 A0A087X0B3 334 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 TMEM189-UBE2V1I3L0A0 370 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 K7ENM7 598 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 TGM5O43548 720 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 RFPL2O75678 378 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 B3GAT3O94766 335 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 KRT18P05783 430 aaKnown RBP23.82■■□□□ 1.4
LIME1-203ENST00000465591 NMT1P30419 496 aaKnown RBP23.82■■□□□ 1.4
LIME1-203ENST00000465591 NASPP49321 788 aaPredicted RBP23.82■■□□□ 1.4
LIME1-203ENST00000465591 SLC10A6Q3KNW5 377 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 ATAT1Q5SQI0 421 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 FOXD4L5Q5VV16 416 aaPredicted RBP23.82■■□□□ 1.4
LIME1-203ENST00000465591 LILRA6Q6PI73 481 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 CEP57Q86XR8 500 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 HSCBQ8IWL3 235 aa23.82■■□□□ 1.4
LIME1-203ENST00000465591 LNX1Q8TBB1 728 aaPredicted RBP23.82■■□□□ 1.4
LIME1-203ENST00000465591 FOXD4L4Q8WXT5 416 aaPredicted RBP23.82■■□□□ 1.4
LIME1-203ENST00000465591 PIK3R5Q8WYR1 880 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms