RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, human

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-213	ENST00000465529	GRM5	P41594	1212 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	ZXDA	P98168	799 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	CEBPZ	Q03701	1054 aa	Known RBP	18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	SOX4	Q06945	474 aa	Predicted RBP	18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	GPBP1	Q86WP2	473 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	CEP57	Q86XR8	500 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	TMEM130	Q8N3G9	435 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	AK8	Q96MA6	479 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	RIPOR3	Q96MK2	946 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	NECTIN4	Q96NY8	510 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	REEP2	Q9BRK0	252 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	TIPIN	Q9BVW5	301 aa		18.83	■□□□□ 0.6
TOM1-213	ENST00000465529	SF3B1	O75533	1304 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	GLUD1	P00367	558 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	MAPT	P10636	758 aa	Known RBP	18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	CLCNKB	P51801	687 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	ATAT1	Q5SQI0	421 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	FAM171A1	Q5VUB5	890 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	CD300LG	Q6UXG3	332 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	GPR149	Q86SP6	731 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	C3orf58	Q8NDZ4	430 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	SPIRE2	Q8WWL2	714 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	CALML4	Q96GE6	196 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	EPSTI1	Q96J88	318 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	ZMAT2	Q96NC0	199 aa	Known RBP	18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	NTPCR	Q9BSD7	190 aa	Known RBP	18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	HAPLN2	Q9GZV7	340 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	SMOC2	Q9H3U7	446 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	C17orf75	Q9HAS0	396 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	ANKFY1	Q9P2R3	1169 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	SSX2IP	Q9Y2D8	614 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	RBM19	Q9Y4C8	960 aa	Known RBP	18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	DOCK6	Q96HP0	2047 aa		18.82	■□□□□ 0.6
TOM1-213	ENST00000465529	SMIM28	A0A1B0GU29	152 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529		I3L4J1	428 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529		K7ELQ4	463 aa	Predicted RBP	18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	TGM5	O43548	720 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	BMP15	O95972	392 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	ASGR2	P07307	311 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	PDC	P20941	246 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	LONP1	P36776	959 aa	Known RBP	18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	MPZL3	Q6UWV2	235 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	RASSF8	Q8NHQ8	419 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	RAD54L	Q92698	747 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	SNX27	Q96L92	541 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	CLIC6	Q96NY7	704 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	TCHP	Q9BT92	498 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	CCDC94	Q9BW85	323 aa	Predicted RBP	18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	FBXO2	Q9UK22	296 aa	Predicted RBP	18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	MTMR6	Q9Y217	621 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	NR2E1	Q9Y466	385 aa		18.81	■□□□□ 0.6
TOM1-213	ENST00000465529	ADAM12	O43184	909 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	MCF2	P10911	925 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	BRCC3	P46736	316 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	NCKAP1L	P55160	1127 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	STRN3	Q13033	797 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	PTPN21	Q16825	1174 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	ALKAL1	Q6UXT8	129 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	TRIM67	Q6ZTA4	783 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	KCTD17	Q8N5Z5	321 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	LNX1	Q8TBB1	728 aa	Predicted RBP	18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	CLSTN3	Q9BQT9	956 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	TTPAL	Q9BTX7	342 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	KCND2	Q9NZV8	630 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	FNIP2	Q9P278	1114 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	HCN4	Q9Y3Q4	1203 aa		18.8	■□□□□ 0.6
TOM1-213	ENST00000465529	CCDC195	A0A1B0GUA6	201 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	TMEM221	A6NGB7	291 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529		M0R296	226 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	B3GAT3	O94766	335 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	BRD1	O95696	1058 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	SMTN	P53814	917 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	YARS	P54577	528 aa	Known RBP	18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	NOLC1	Q14978	699 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	PSMD5	Q16401	504 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	XKR4	Q5GH76	650 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	LILRA6	Q6PI73	481 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	TDRD5	Q8NAT2	981 aa	Known RBP	18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	C18orf25	Q96B23	403 aa	Predicted RBP	18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	INTS4	Q96HW7	963 aa	Known RBP	18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	USP28	Q96RU2	1077 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
TOM1-213	ENST00000465529	ZNF318	Q5VUA4	2279 aa		18.79	■□□□□ 0.6
TOM1-213	ENST00000465529		K7ENM7	598 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	SLC26A4	O43511	780 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	TOM1L1	O75674	476 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	FAM13A	O94988	1023 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	TKT	P29401	623 aa	Known RBP	18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	SPAG1	Q07617	926 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	UPP1	Q16831	310 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	CCDC149	Q6ZUS6	474 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	HAUS6	Q7Z4H7	955 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	MYCT1	Q8N699	235 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	KREMEN2	Q8NCW0	462 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	PIK3R5	Q8WYR1	880 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	LARP4B	Q92615	738 aa	Known RBP	18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	ZNF707	Q96C28	371 aa	Predicted RBP	18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	ACAP3	Q96P50	834 aa		18.78	■□□□□ 0.6
TOM1-213	ENST00000465529	CCSER1	Q9C0I3	900 aa		18.78	■□□□□ 0.6

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