RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 BADQ92934 168 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 CCDC51Q96ER9 411 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 FTHL17Q9BXU8 183 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 RPF1Q9H9Y2 349 aaKnown RBP18.69■□□□□ 0.58
PTPRU-206ENST00000465525 ZMYND8Q9ULU4 1186 aaPredicted RBP18.69■□□□□ 0.58
PTPRU-206ENST00000465525 PTPRJQ12913 1337 aa18.69■□□□□ 0.58
PTPRU-206ENST00000465525 MEIS3P2A8K0S8 358 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 PFKMP08237 780 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 GCLMP48507 274 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 UBXN1Q04323 297 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 PPP3CAQ08209 521 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 NR1I3Q14994 352 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 PSMD6Q15008 389 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 FILIP1LQ4L180 1135 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 RTN4RL1Q86UN2 441 aaPredicted RBP18.68■□□□□ 0.58
PTPRU-206ENST00000465525 RNF169Q8NCN4 708 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 PARD3BQ8TEW8 1205 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 LPPQ93052 612 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 ACAP3Q96P50 834 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 CCDC94Q9BW85 323 aaPredicted RBP18.68■□□□□ 0.58
PTPRU-206ENST00000465525 FAM105AQ9NUU6 356 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 KLK14Q9P0G3 267 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 PARP2Q9UGN5 583 aa18.68■□□□□ 0.58
PTPRU-206ENST00000465525 PDCD11Q14690 1871 aaKnown RBP18.68■□□□□ 0.58
PTPRU-206ENST00000465525 LACTBL1A8MY62 500 aa18.67■□□□□ 0.58
PTPRU-206ENST00000465525 CBFA2T2O43439 604 aa18.67■□□□□ 0.58
PTPRU-206ENST00000465525 RECQL4O94761 1208 aa18.67■□□□□ 0.58
PTPRU-206ENST00000465525 AFPP02771 609 aaKnown RBP18.67■□□□□ 0.58
PTPRU-206ENST00000465525 FPGSQ05932 587 aa18.67■□□□□ 0.58
PTPRU-206ENST00000465525 PPIGQ13427 754 aaKnown RBP eCLIP18.67■□□□□ 0.582e-7■■□□□ 11.8
PTPRU-206ENST00000465525 SLC10A6Q3KNW5 377 aa18.67■□□□□ 0.58
PTPRU-206ENST00000465525 TMEM130Q8N3G9 435 aa18.67■□□□□ 0.58
PTPRU-206ENST00000465525 TMC2Q8TDI7 906 aa18.67■□□□□ 0.58
PTPRU-206ENST00000465525 LBHD1Q9BQE6 289 aaPredicted RBP18.67■□□□□ 0.58
PTPRU-206ENST00000465525 IL23AQ9NPF7 189 aa18.67■□□□□ 0.58
PTPRU-206ENST00000465525 CBWD6Q4V339 395 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 CBWD3Q5JTY5 395 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 CBWD5Q5RIA9 395 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 ZNF516Q92618 1163 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 VWCEQ96DN2 955 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 FNBP1Q96RU3 617 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 MICAL3Q7RTP6 2002 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 TNNI1P19237 187 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 KLK7P49862 253 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 HSP90AA2PQ14568 343 aaPredicted RBP18.66■□□□□ 0.58
PTPRU-206ENST00000465525 CNKSR3Q6P9H4 555 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 OR5B17Q8NGF7 314 aa18.66■□□□□ 0.58
PTPRU-206ENST00000465525 CAPN15O75808 1086 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 NFICP08651 508 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 FMO5P49326 533 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 YARSP54577 528 aaKnown RBP18.65■□□□□ 0.58
PTPRU-206ENST00000465525 PPP2R3AQ06190 1150 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 IKBKEQ14164 716 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 KYAT1Q16773 422 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 FKBP15Q5T1M5 1219 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 JADE1Q6IE81 842 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 EFCAB13Q8IY85 973 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 SNX27Q96L92 541 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 CGRRF1Q99675 332 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 TRAIPQ9BWF2 469 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 RGS18Q9NS28 235 aa18.65■□□□□ 0.58
PTPRU-206ENST00000465525 TTC26A0AVF1 554 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 ITGA4P13612 1032 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 ATF7P17544 494 aaPredicted RBP18.64■□□□□ 0.57
PTPRU-206ENST00000465525 TFAMQ00059 246 aaKnown RBP18.64■□□□□ 0.57
PTPRU-206ENST00000465525 MYL7Q01449 175 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 SYCP1Q15431 976 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 GLRA4Q5JXX5 417 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 SCARA3Q6AZY7 606 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 SPC24Q8NBT2 197 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 MRFAP1L1Q96HT8 127 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 TMEM117Q9H0C3 514 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.64■□□□□ 0.57
PTPRU-206ENST00000465525 LTBP2Q14767 1821 aa18.64■□□□□ 0.57
PTPRU-206ENST00000465525 A0A0U1RQF3 1178 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 IL18RAPO95256 599 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 TPM3P06753 285 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 APBA1Q02410 837 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 TMC6Q7Z403 805 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 ECHDC2Q86YB7 292 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 DRC7Q8IY82 874 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 ANP32BQ92688 251 aaKnown RBP18.63■□□□□ 0.57
PTPRU-206ENST00000465525 ELMO3Q96BJ8 720 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 PCMTD1Q96MG8 357 aaPredicted RBP18.63■□□□□ 0.57
PTPRU-206ENST00000465525 ZFP42Q96MM3 310 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 MTMR12Q9C0I1 747 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 TSPYL2Q9H2G4 693 aaPredicted RBP18.63■□□□□ 0.57
PTPRU-206ENST00000465525 ABHD14A-ACY1A0A1B0GW23 586 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 C9IYK1 514 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 ENPP3O14638 875 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 LRRN2O75325 713 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 ACRP10323 421 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 SKIP12755 728 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 ACTN1P12814 892 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 MXI1P50539 228 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 RAB27AP51159 221 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 GUCY2FP51841 1108 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 AGMOQ6ZNB7 445 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 SLC24A5Q71RS6 500 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms