RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 MAFGO15525 162 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 NR3C2P08235 984 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 DPEP1P16444 411 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 KCNJ1P48048 391 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 GCNT1Q02742 428 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 ADCY2Q08462 1091 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 CLEC16AQ2KHT3 1053 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 BRDTQ58F21 947 aaPredicted RBP19.62■□□□□ 0.73
SYNE4-204ENST00000465425 CIAPIN1Q6FI81 312 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 CPLX4Q7Z7G2 160 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 VSIG10LQ86VR7 867 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 MCPH1Q8NEM0 835 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 IFT74Q96LB3 600 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 CEP89Q96ST8 783 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 PI4K2AQ9BTU6 479 aa19.62■□□□□ 0.73
SYNE4-204ENST00000465425 CLDN3O15551 220 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 DGAT1O75907 488 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 GARTP22102 1010 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 C6orf118Q5T5N4 469 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 ATG4CQ96DT6 458 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 CABS1Q96KC9 395 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 FAM81BQ96LP2 452 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 TEPSINQ96N21 525 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 SELENOSQ9BQE4 189 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 SENP7Q9BQF6 1050 aa19.61■□□□□ 0.73
SYNE4-204ENST00000465425 DDX20Q9UHI6 824 aaKnown RBP19.61■□□□□ 0.73
SYNE4-204ENST00000465425 ZNF862O60290 1169 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 PSAPP07602 524 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 FGFR4P22455 802 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 SP4Q02446 784 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 SGO2Q562F6 1265 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 SWSAP1Q6NVH7 229 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 CCDC121Q6ZUS5 278 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 C12orf50Q8NA57 414 aaPredicted RBP19.6■□□□□ 0.73
SYNE4-204ENST00000465425 MDM1Q8TC05 714 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 BBXQ8WY36 941 aaPredicted RBP19.6■□□□□ 0.73
SYNE4-204ENST00000465425 FAM129AQ9BZQ8 928 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 SEPT9Q9UHD8 586 aaPredicted RBP19.6■□□□□ 0.73
SYNE4-204ENST00000465425 ZC3H11AO75152 810 aaKnown RBP eCLIP19.6■□□□□ 0.73
SYNE4-204ENST00000465425 FSBPO95073 299 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 RARGP13631 454 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 LLGL1Q15334 1064 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 SIX1Q15475 284 aaPredicted RBP19.6■□□□□ 0.73
SYNE4-204ENST00000465425 GKAP1Q5VSY0 366 aaPredicted RBP19.6■□□□□ 0.73
SYNE4-204ENST00000465425 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
SYNE4-204ENST00000465425 CCDC25Q86WR0 208 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 KAT2BQ92831 832 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 ART4Q93070 314 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 AZI2Q9H6S1 392 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 LRRC19Q9H756 370 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 RIPK3Q9Y572 518 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 ADGRA3Q8IWK6 1321 aa19.6■□□□□ 0.73
SYNE4-204ENST00000465425 GRIN3BO60391 1043 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 SCP2P22307 547 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 QPCTQ16769 361 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 FBXW10Q5XX13 1052 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 CACNA2D3Q8IZS8 1091 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 UHMK1Q8TAS1 419 aaKnown RBP19.59■□□□□ 0.73
SYNE4-204ENST00000465425 JDP2Q8WYK2 163 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 CENPTQ96BT3 561 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 FNBP1Q96RU3 617 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 STMN4Q9H169 189 aaPredicted RBP19.59■□□□□ 0.73
SYNE4-204ENST00000465425 ATP6V0A4Q9HBG4 840 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 H0YCG3 227 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 RIPK2O43353 540 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 WDR44Q5JSH3 913 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 C6orf89Q6UWU4 347 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 WNK4Q96J92 1243 aa19.59■□□□□ 0.73
SYNE4-204ENST00000465425 XPO6Q96QU8 1125 aaKnown RBP19.59■□□□□ 0.73
SYNE4-204ENST00000465425 JPH1Q9HDC5 661 aaPredicted RBP19.59■□□□□ 0.73
SYNE4-204ENST00000465425 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.59■□□□□ 0.73
SYNE4-204ENST00000465425 AGTP01019 485 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 CHN1P15882 459 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 TNNI1P19237 187 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 KCNA3P22001 575 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 LIG4P49917 911 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 EN1Q05925 392 aaPredicted RBP19.58■□□□□ 0.73
SYNE4-204ENST00000465425 ENPEPQ07075 957 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 ERMARDQ5T6L9 678 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 SNRNP48Q6IEG0 339 aaKnown RBP19.58■□□□□ 0.73
SYNE4-204ENST00000465425 NSUN6Q8TEA1 469 aaKnown RBP19.58■□□□□ 0.73
SYNE4-204ENST00000465425 C1orf54Q8WWF1 131 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 PSPC1Q8WXF1 523 aaKnown RBP19.58■□□□□ 0.73
SYNE4-204ENST00000465425 TRIM11Q96F44 468 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 CHMP6Q96FZ7 201 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 SEC16BQ96JE7 1060 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 PCDHB2Q9Y5E7 798 aa19.58■□□□□ 0.73
SYNE4-204ENST00000465425 FSCN2O14926 492 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 CALCAP01258 141 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 KCNA2P16389 499 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 ABCD1P33897 745 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 MMP13P45452 471 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 RTP1P59025 263 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 PRKCEQ02156 737 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 KRT17Q04695 432 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 MMS22LQ6ZRQ5 1243 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 ZNF677Q86XU0 584 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 MCOLN2Q8IZK6 566 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 MAIP1Q8WWC4 291 aa19.58■□□□□ 0.72
SYNE4-204ENST00000465425 POLR3FQ9H1D9 316 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms