RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ANKFY1Q9P2R3 1169 aa21.15■□□□□ 0.98
CCHCR1-210ENST00000464012 SMTNP53814 917 aa21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 KARSQ15046 597 aaKnown RBP21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 PTPN21Q16825 1174 aa21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 FAM171A1Q5VUB5 890 aa21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 GPR149Q86SP6 731 aa21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 GPBP1Q86WP2 473 aa21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 KCTD17Q8N5Z5 321 aa21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 LRRC15Q8TF66 581 aa21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 PPP1R10Q96QC0 940 aaKnown RBP21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 KCND2Q9NZV8 630 aa21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 CLIC4Q9Y696 253 aa21.14■□□□□ 0.97
CCHCR1-210ENST00000464012 TMEM221A6NGB7 291 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 M0R296 226 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 PLCG1P19174 1290 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 LONP1P36776 959 aaKnown RBP21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 ARSHQ5FYA8 562 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 FAM173BQ6P4H8 233 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 ELMSAN1Q6PJG2 1045 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 MPZL3Q6UWV2 235 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 TRIM67Q6ZTA4 783 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 TMEM161BQ8NDZ6 487 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 SPIRE2Q8WWL2 714 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 ZBTB45Q96K62 511 aaPredicted RBP21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 PTPRHQ9HD43 1115 aa21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 TOPORSQ9NS56 1045 aaPredicted RBP21.13■□□□□ 0.97
CCHCR1-210ENST00000464012 CCDC195A0A1B0GUA6 201 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 RFPL2O75678 378 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 MAPTP10636 758 aaKnown RBP21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 MCF2P10911 925 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 SYT1P21579 422 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 MATR3P43243 847 aaKnown RBP eCLIP21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 CLCNKBP51801 687 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 CREMQ03060 361 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 RESTQ13127 1097 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 MCM6Q14566 821 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 CCDC149Q6ZUS6 474 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 REEP2Q9BRK0 252 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 TTPALQ9BTX7 342 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 BLOC1S4Q9NUP1 217 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 FNIP2Q9P278 1114 aa21.12■□□□□ 0.97
CCHCR1-210ENST00000464012 SMIM28A0A1B0GU29 152 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 ABLIM1O14639 778 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 SLC26A4O43511 780 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 TGM5O43548 720 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 B3GAT3O94766 335 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 KRT18P05783 430 aaKnown RBP21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 PROZP22891 400 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 IGFBP6P24592 240 aaPredicted RBP21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 MARCKSP29966 332 aaPredicted RBP21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 CEBPZQ03701 1054 aaKnown RBP21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 NOLC1Q14978 699 aaKnown RBP eCLIP21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 PSMD5Q16401 504 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 SEZ6Q53EL9 994 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 SPECC1Q5M775 1068 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 C15orf39Q6ZRI6 1047 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 KREMEN2Q8NCW0 462 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 RAD54LQ92698 747 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 FAM122AQ96E09 287 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 BICD1Q96G01 975 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 SNX27Q96L92 541 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 NTPCRQ9BSD7 190 aaKnown RBP21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 ZHX3Q9H4I2 956 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 LARSQ9P2J5 1176 aaKnown RBP21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 DPP7Q9UHL4 492 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 KMT2EQ8IZD2 1858 aa21.11■□□□□ 0.97
CCHCR1-210ENST00000464012 K7ELQ4 463 aaPredicted RBP21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 FAM13AO94988 1023 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 ASGR2P07307 311 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 PLA2G5P39877 138 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 SOX4Q06945 474 aaPredicted RBP21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 SIGLEC14Q08ET2 396 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 ELAVL2Q12926 359 aaKnown RBP21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 PIK3R5Q8WYR1 880 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 SMG7Q92540 1137 aaKnown RBP21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 UROC1Q96N76 676 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 ACAP3Q96P50 834 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 DAXXQ9UER7 740 aaPredicted RBP21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 LIMD1Q9UGP4 676 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 KCNG1Q9UIX4 513 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 ODF2LQ9ULJ1 636 aa21.1■□□□□ 0.97
CCHCR1-210ENST00000464012 I3L4J1 428 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 K7ENM7 598 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 TOM1L1O75674 476 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 NCKAP1LP55160 1127 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 PTPAQ15257 358 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 HAUS6Q7Z4H7 955 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 GPR65Q8IYL9 337 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 MYCT1Q8N699 235 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 CMASQ8NFW8 434 aaPredicted RBP21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 LNX1Q8TBB1 728 aaPredicted RBP21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 LARP4BQ92615 738 aaKnown RBP21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 PBXIP1Q96AQ6 731 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 ACSF2Q96CM8 615 aaPredicted RBP21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 EPSTI1Q96J88 318 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 ZMAT2Q96NC0 199 aaKnown RBP21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 SMOC2Q9H3U7 446 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 PIDD1Q9HB75 910 aa21.09■□□□□ 0.97
CCHCR1-210ENST00000464012 SORCS3Q9UPU3 1222 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms