RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 XKR4Q5GH76 650 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 AXDND1Q5T1B0 1012 aaPredicted RBP14.21□□□□□ -0.14
XRN1-203ENST00000463916 KIAA0319Q5VV43 1072 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 ANKRD54Q6NXT1 300 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 KANK3Q6NY19 840 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 SHC4Q6S5L8 630 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 ZPBP2Q6X784 338 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 IKZF4Q9H2S9 585 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 GOLGA2P5Q9HBQ8 144 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 CHST7Q9NS84 486 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 ADAM28Q9UKQ2 775 aa14.21□□□□□ -0.14
XRN1-203ENST00000463916 K7ENM7 598 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 KIF4AO95239 1232 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 ZP2Q05996 745 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 MCL1Q07820 350 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 BMS1Q14692 1282 aaKnown RBP14.2□□□□□ -0.14
XRN1-203ENST00000463916 FUT10Q6P4F1 479 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 CCDC73Q6ZRK6 1079 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 SV2BQ7L1I2 683 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 SLC22A17Q8WUG5 538 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 STAMQ92783 540 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 KLHL5Q96PQ7 755 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 HERC2P3Q9BVR0 1158 aa14.2□□□□□ -0.14
XRN1-203ENST00000463916 CCDC94Q9BW85 323 aaPredicted RBP14.2□□□□□ -0.14
XRN1-203ENST00000463916 MRPL17Q9NRX2 175 aaKnown RBP14.2□□□□□ -0.14
XRN1-203ENST00000463916 USP15Q9Y4E8 981 aaPredicted RBP14.2□□□□□ -0.14
XRN1-203ENST00000463916 FSD2A1L4K1 749 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 CLDN3O15551 220 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 TBCAO75347 108 aaKnown RBP14.19□□□□□ -0.14
XRN1-203ENST00000463916 TADA2AO75478 443 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 STAT6P42226 847 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 SOX4Q06945 474 aaPredicted RBP14.19□□□□□ -0.14
XRN1-203ENST00000463916 NOLC1Q14978 699 aaKnown RBP eCLIP14.19□□□□□ -0.14
XRN1-203ENST00000463916 E2F4Q16254 413 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 SLC10A6Q3KNW5 377 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 SLC39A4Q6P5W5 647 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 APBB1IPQ7Z5R6 666 aaPredicted RBP14.19□□□□□ -0.14
XRN1-203ENST00000463916 GJD3Q8N144 294 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 ACAP3Q96P50 834 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 STK39Q9UEW8 545 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 TISP43B9A030 160 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 H0YCG3 227 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 CLCNKBP51801 687 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 GTF2BQ00403 316 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 DSG1Q02413 1049 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 ZBTB41Q5SVQ8 909 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 CD300LGQ6UXG3 332 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 SFR1Q86XK3 245 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 ADHFE1Q8IWW8 467 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 TMEM130Q8N3G9 435 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 C12orf76Q8N812 135 aaPredicted RBP14.19□□□□□ -0.14
XRN1-203ENST00000463916 SUSD6Q92537 303 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 BICD1Q96G01 975 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 SNX27Q96L92 541 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 PCDHA7Q9UN72 937 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 FAM50BQ9Y247 325 aa14.19□□□□□ -0.14
XRN1-203ENST00000463916 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 TEX28O15482 410 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 FAM189A1O60320 539 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 CUTAO60888 179 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 URODP06132 367 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 TNFSF9P41273 254 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 GLUD2P49448 558 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 CLCN4P51793 760 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 YARSP54577 528 aaKnown RBP14.18□□□□□ -0.14
XRN1-203ENST00000463916 KCNA1Q09470 495 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 RTP2Q5QGT7 225 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 ZNF720Q7Z2F6 126 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 TMEM87AQ8NBN3 555 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 C3orf58Q8NDZ4 430 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 CASP10Q92851 521 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 C18orf25Q96B23 403 aaPredicted RBP14.18□□□□□ -0.14
XRN1-203ENST00000463916 TOPORSQ9NS56 1045 aaPredicted RBP14.18□□□□□ -0.14
XRN1-203ENST00000463916 TBC1D7Q9P0N9 293 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 ANKRD63C9JTQ0 380 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 HNRNPDLO14979 420 aaKnown RBP14.18□□□□□ -0.14
XRN1-203ENST00000463916 PIGRP01833 764 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 KLRC2P26717 231 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 LIG4P49917 911 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 UPP1Q16831 310 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 STRA6Q9BX79 667 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 FGFBP2Q9BYJ0 223 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 ST6GALNAC4Q9H4F1 302 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 RXFP1Q9HBX9 757 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 CNTN3Q9P232 1028 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 PRKAG3Q9UGI9 489 aa14.18□□□□□ -0.14
XRN1-203ENST00000463916 PPP1R37O75864 691 aa14.17□□□□□ -0.14
XRN1-203ENST00000463916 WEE2P0C1S8 567 aa14.17□□□□□ -0.14
XRN1-203ENST00000463916 CXCL8P10145 99 aa14.17□□□□□ -0.14
XRN1-203ENST00000463916 MYBP10242 640 aa14.17□□□□□ -0.14
XRN1-203ENST00000463916 KCNE1P15382 129 aa14.17□□□□□ -0.14
XRN1-203ENST00000463916 HOXB8P17481 243 aaPredicted RBP14.17□□□□□ -0.14
XRN1-203ENST00000463916 RPL17P18621 184 aaKnown RBP14.17□□□□□ -0.14
XRN1-203ENST00000463916 SSTR3P32745 418 aaPredicted RBP14.17□□□□□ -0.14
XRN1-203ENST00000463916 MATR3P43243 847 aaKnown RBP eCLIP14.17□□□□□ -0.14
XRN1-203ENST00000463916 ME1P48163 572 aa14.17□□□□□ -0.14
XRN1-203ENST00000463916 CASP5P51878 434 aa14.17□□□□□ -0.14
XRN1-203ENST00000463916 SPAG1Q07617 926 aa14.17□□□□□ -0.14
XRN1-203ENST00000463916 USP41Q3LFD5 358 aa14.17□□□□□ -0.14
XRN1-203ENST00000463916 FAM171A1Q5VUB5 890 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms