RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 BTKQ06187 659 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 EIF4A2Q14240 407 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 PDCD4Q53EL6 469 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 RFX8Q6ZV50 586 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 CYP2U1Q7Z449 544 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 VPS36Q86VN1 386 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 MCF2L2Q86YR7 1114 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 CD302Q8IX05 232 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 FITM2Q8N6M3 262 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 LINC00301Q8NCQ3 95 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 FAM13CQ8NE31 585 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 UTP4Q969X6 686 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 VPS50Q96JG6 964 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 TM6SF1Q9BZW5 370 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 LACRTQ9GZZ8 138 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 LRRC4CQ9HCJ2 640 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 ATP13A2Q9NQ11 1180 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 TMPRSS4Q9NRS4 437 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 FGFR1OP2Q9NVK5 253 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 FAIMQ9NVQ4 179 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 TRNAU1APQ9NX07 287 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 TLR7Q9NYK1 1049 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 KIAA1522Q9P206 1035 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 HAO1Q9UJM8 370 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 CCPG1Q9ULG6 757 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 STX8Q9UNK0 236 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 GIT1Q9Y2X7 761 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 HBS1LQ9Y450 684 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 USP15Q9Y4E8 981 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 SALL3Q9BXA9 1300 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 SIPA1L3O60292 1781 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 MGAMO43451 1857 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 A0A087WZG4 1122 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 A0A1B0GTH6 734 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 CFAP69A5D8W1 941 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 PCP4L1A6NKN8 68 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 A6NL46 340 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 TBKBP1A7MCY6 615 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 USP17L5A8MUK1 530 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 AP3B1O00203 1094 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 CAPN9O14815 690 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 AXIN1O15169 862 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 MTRF1O75570 445 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 SUN1O94901 812 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 MOCS3O95396 460 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 ZBTB11O95625 1053 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 GLULP15104 373 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 SDHBP21912 280 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 TXKP42681 527 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 PCYT1AP49585 367 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 RNF144AP50876 292 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 ZBTB17Q13105 803 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 BIRC3Q13489 604 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 E2F2Q14209 437 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 KPNB1Q14974 876 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 HLFQ16534 295 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 ANKDD1AQ495B1 522 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 PARP10Q53GL7 1025 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 COBLL1Q53SF7 1204 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 RESP18Q5W5W9 173 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 RBM44Q6ZP01 1051 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 HDGFL2Q7Z4V5 671 aaPredicted RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 PIGWQ7Z7B1 504 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 DDX42Q86XP3 938 aaKnown RBP eCLIP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 BRSK2Q8IWQ3 736 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 FAM186BQ8IYM0 893 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 ZNF280CQ8ND82 737 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 FNDC8Q8TC99 324 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 GAB3Q8WWW8 586 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 LPIN2Q92539 896 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 GATA6Q92908 595 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 IQCDQ96DY2 449 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 FAM227BQ96M60 508 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 SLC4A9Q96Q91 983 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 FERD3LQ96RJ6 166 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 PRPF18Q99633 342 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 ZFAND3Q9H8U3 227 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 PARVBQ9HBI1 364 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 AS3MTQ9HBK9 375 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 ZNF304Q9HCX3 659 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 SAP30BPQ9UHR5 308 aaKnown RBP3.84□□□□□ -1.79
COL8A1-205ENST00000463753 SNX12Q9UMY4 172 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 TELO2Q9Y4R8 837 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 PCDHB11Q9Y5F2 797 aa3.84□□□□□ -1.79
COL8A1-205ENST00000463753 PI4K2BG5E9Z4 385 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 MATN2O00339 956 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 BIRC5O15392 142 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 RNF113AO15541 343 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 SURF6O75683 361 aaKnown RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 TRPA1O75762 1119 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 KRT36O76013 467 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 ZBED1O96006 694 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 ALDH2P05091 517 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 ENO2P09104 434 aaPredicted RBP3.84□□□□□ -1.8
COL8A1-205ENST00000463753 PAEPP09466 180 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 ZNF18P17022 549 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 FBLN1P23142 703 aa3.84□□□□□ -1.8
COL8A1-205ENST00000463753 RPS12P25398 132 aaKnown RBP3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms