RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ABLIM1O14639 778 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 BMP15O95972 392 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 CUL4AQ13619 759 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 RTP2Q5QGT7 225 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 ALKAL1Q6UXT8 129 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 BRAPQ7Z569 592 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 ACSF2Q96CM8 615 aaPredicted RBP22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 UROC1Q96N76 676 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 TTPALQ9BTX7 342 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 CDT1Q9H211 546 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 ZDHHC7Q9NXF8 308 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 CACNG4Q9UBN1 327 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 GDAQ9Y2T3 454 aa22.57■■□□□ 1.2
PDLIM4-205ENST00000463615 MYO10Q9HD67 2058 aa22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 C2orf16Q68DN1 1984 aa22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 VWA3AA6NCI4 1184 aa22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 SPDYE4A6NLX3 237 aa22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 TGM5O43548 720 aa22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 SLC12A3P55017 1021 aa22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 PDXDC1Q6P996 788 aa22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 ZBTB33Q86T24 672 aa22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 RABGGTAQ92696 567 aa22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 ZNF707Q96C28 371 aaPredicted RBP22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 WDR6Q9NNW5 1121 aaKnown RBP22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 MTCL1Q9Y4B5 1905 aaKnown RBP22.56■■□□□ 1.2
PDLIM4-205ENST00000463615 CCDC195A0A1B0GUA6 201 aa22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 MCF2P10911 925 aa22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 PLS3P13797 630 aa22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 DCLRE1AQ6PJP8 1040 aa22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 SUGP1Q8IWZ8 645 aaKnown RBP22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 LNX1Q8TBB1 728 aaPredicted RBP22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 PRRX2Q99811 253 aa22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 CCDC94Q9BW85 323 aaPredicted RBP22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 TOPORSQ9NS56 1045 aaPredicted RBP22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 LIMD1Q9UGP4 676 aa22.55■■□□□ 1.2
PDLIM4-205ENST00000463615 SMIM28A0A1B0GU29 152 aa22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 PLA2G4BP0C869 781 aa22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 FGFR3P22607 806 aa22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 ZNF568Q3ZCX4 644 aa22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 FAM171A1Q5VUB5 890 aa22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 MPZL3Q6UWV2 235 aa22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 CD300LGQ6UXG3 332 aa22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 TMEM161BQ8NDZ6 487 aa22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 CLSTN3Q9BQT9 956 aa22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 TARS2Q9BW92 718 aaKnown RBP22.54■■□□□ 1.2
PDLIM4-205ENST00000463615 SLC16A4O15374 487 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 RFPL2O75678 378 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 KCNE1P15382 129 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 SCP2P22307 547 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 SMTNP53814 917 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 YARSP54577 528 aaKnown RBP22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 UPP1Q16831 310 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 PRSS55Q6UWB4 352 aaPredicted RBP22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 ZPBP2Q6X784 338 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 PALB2Q86YC2 1186 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 CEP120Q8N960 986 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 STAMQ92783 540 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 CDK5RAP3Q96JB5 506 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 PRKD2Q9BZL6 878 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 FBXW11Q9UKB1 542 aa22.53■■□□□ 1.2
PDLIM4-205ENST00000463615 SFI1A8K8P3 1242 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 TOM1L1O75674 476 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 ZMYND10O75800 440 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 ASGR2P07307 311 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 MAPTP10636 758 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 RPL17P18621 184 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 LONP1P36776 959 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 NUBP1P53384 320 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 ZRSR1Q15695 479 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 PSMD5Q16401 504 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 ARSHQ5FYA8 562 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 HASPINQ8TF76 798 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 SMG7Q92540 1137 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 DDX27Q96GQ7 796 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 SNX27Q96L92 541 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 SLC38A7Q9NVC3 462 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 CNTN3Q9P232 1028 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 IGSF9Q9P2J2 1179 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 ODF2LQ9ULJ1 636 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 CLUHO75153 1309 aa22.52■■□□□ 1.2
PDLIM4-205ENST00000463615 KMT2EQ8IZD2 1858 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 H0YCG3 227 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 N4BP1O75113 896 aaKnown RBP22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 B3GAT3O94766 335 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 POU2F2P09086 479 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 CLCNKBP51801 687 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 NHLH1Q02575 133 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 GLRA4Q5JXX5 417 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 ACAP3Q96P50 834 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 LARSQ9P2J5 1176 aaKnown RBP22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 EPS15L1Q9UBC2 864 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 VWA8A3KMH1 1905 aa22.51■■□□□ 1.19
PDLIM4-205ENST00000463615 TRIP11Q15643 1979 aa22.5■■□□□ 1.19
PDLIM4-205ENST00000463615 TRAPPC3O43617 180 aa22.5■■□□□ 1.19
PDLIM4-205ENST00000463615 HNRNPA1P09651 372 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDLIM4-205ENST00000463615 SPATA31D3P0C874 917 aa22.5■■□□□ 1.19
PDLIM4-205ENST00000463615 PDCP20941 246 aa22.5■■□□□ 1.19
PDLIM4-205ENST00000463615 HOXA9P31269 272 aa22.5■■□□□ 1.19
PDLIM4-205ENST00000463615 UBA7P41226 1012 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms