RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 TAS1R1Q7RTX1 841 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 RABGGTAQ92696 567 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 ZBTB45Q96K62 511 aaPredicted RBP17.77■□□□□ 0.44
COL1A1-202ENST00000463440 KLHL5Q96PQ7 755 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 CXCL16Q9H2A7 254 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 DZANK1Q9NVP4 752 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 TBX20Q9UMR3 447 aa17.77■□□□□ 0.44
COL1A1-202ENST00000463440 SF3B1O75533 1304 aaKnown RBP eCLIP17.76■□□□□ 0.43
COL1A1-202ENST00000463440 CNPP09543 421 aaKnown RBP17.76■□□□□ 0.43
COL1A1-202ENST00000463440 LIG4P49917 911 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 DSG1Q02413 1049 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 MCL1Q07820 350 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 NAB2Q15742 525 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 FOXD4L6Q3SYB3 417 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-202ENST00000463440 GLRA4Q5JXX5 417 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 KIAA0319Q5VV43 1072 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 FOXD4L3Q6VB84 417 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-202ENST00000463440 DYMQ7RTS9 669 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 SLC22A17Q8WUG5 538 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 DDX12PQ92771 950 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 UROC1Q96N76 676 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 PPP1R10Q96QC0 940 aaKnown RBP17.76■□□□□ 0.43
COL1A1-202ENST00000463440 PAAF1Q9BRP4 392 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 PANK2Q9BZ23 570 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 GPR62Q9BZJ7 368 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 S1PR5Q9H228 398 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 CD320Q9NPF0 282 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 SLC38A7Q9NVC3 462 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 CACNG4Q9UBN1 327 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 BDP1A6H8Y1 2624 aa17.76■□□□□ 0.43
COL1A1-202ENST00000463440 SMIM28A0A1B0GU29 152 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 HNRNPDLO14979 420 aaKnown RBP17.75■□□□□ 0.43
COL1A1-202ENST00000463440 CUTAO60888 179 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 ADH1AP07327 375 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 EPCAMP16422 314 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 ITIH3Q06033 890 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 ELAVL2Q12926 359 aaKnown RBP17.75■□□□□ 0.43
COL1A1-202ENST00000463440 XKR4Q5GH76 650 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 CES5AQ6NT32 575 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 ALKAL1Q6UXT8 129 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 GPR65Q8IYL9 337 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 PDILTQ8N807 584 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 KCNG4Q8TDN1 519 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 HASPINQ8TF76 798 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 SUSD6Q92537 303 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 SNX27Q96L92 541 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 APOL5Q9BWW9 433 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 CHST7Q9NS84 486 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 CFAP45Q9UL16 551 aa17.75■□□□□ 0.43
COL1A1-202ENST00000463440 MYMKA6NI61 221 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 C19orf67A6NJJ6 358 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 SPDYE4A6NLX3 237 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 KIF4AO95239 1232 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 PIGRP01833 764 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 KCNE1P15382 129 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 GAP43P17677 238 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 NMT1P30419 496 aaKnown RBP17.74■□□□□ 0.43
COL1A1-202ENST00000463440 CLCN4P51793 760 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 GTF2BQ00403 316 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 CREMQ03060 361 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 PKP1Q13835 747 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 CBX2Q14781 532 aaPredicted RBP17.74■□□□□ 0.43
COL1A1-202ENST00000463440 KYAT1Q16773 422 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 RIN2Q8WYP3 895 aaPredicted RBP17.74■□□□□ 0.43
COL1A1-202ENST00000463440 FIZ1Q96SL8 496 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 PHF7Q9BWX1 381 aaPredicted RBP17.74■□□□□ 0.43
COL1A1-202ENST00000463440 ST6GALNAC4Q9H4F1 302 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 RXFP1Q9HBX9 757 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.74■□□□□ 0.43
COL1A1-202ENST00000463440 CNTN3Q9P232 1028 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 SEL1LQ9UBV2 794 aa17.74■□□□□ 0.43
COL1A1-202ENST00000463440 TRIP11Q15643 1979 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 A0A087X0B3 334 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 TMEM189-UBE2V1I3L0A0 370 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 TEX28O15482 410 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 CLTAP09496 248 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 ELMSAN1Q6PJG2 1045 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 DCLRE1AQ6PJP8 1040 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 SFR1Q86XK3 245 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 DDX27Q96GQ7 796 aaKnown RBP17.73■□□□□ 0.43
COL1A1-202ENST00000463440 B3GALT6Q96L58 329 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 FBXL18Q96ME1 805 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 LRRC27Q9C0I9 530 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 ADAM7Q9H2U9 754 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 DPP7Q9UHL4 492 aa17.73■□□□□ 0.43
COL1A1-202ENST00000463440 CITO14578 2027 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 B3GAT3O94766 335 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 IDEP14735 1019 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 MTHFRP42898 656 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 ME1P48163 572 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 CLCNKBP51801 687 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 UPP1Q16831 310 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 SLC10A6Q3KNW5 377 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 SEZ6Q53EL9 994 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 RARS2Q5T160 578 aaKnown RBP17.72■□□□□ 0.43
COL1A1-202ENST00000463440 FAM171A1Q5VUB5 890 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 ZNF720Q7Z2F6 126 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 MAP4K3Q8IVH8 894 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 HVCN1Q96D96 273 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 DNAJC19Q96DA6 116 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms