RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 HAUS6Q7Z4H7 955 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 RNF168Q8IYW5 571 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-203ENST00000463172 SLC22A17Q8WUG5 538 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 DDX27Q96GQ7 796 aaKnown RBP14.34□□□□□ -0.11
HDAC1-203ENST00000463172 RPGRIP1Q96KN7 1286 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 FBXL18Q96ME1 805 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 REEP2Q9BRK0 252 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 APOL5Q9BWW9 433 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 RXFP1Q9HBX9 757 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 PTPRHQ9HD43 1115 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 CD320Q9NPF0 282 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 ANKFY1Q9P2R3 1169 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 FBXO2Q9UK22 296 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-203ENST00000463172 C5orf42Q9H799 3197 aa14.34□□□□□ -0.11
HDAC1-203ENST00000463172 MTCL1Q9Y4B5 1905 aaKnown RBP14.33□□□□□ -0.11
HDAC1-203ENST00000463172 LOC730098B7Z3J9 87 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 PTGESO14684 152 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 TRAK2O60296 914 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 LILRB3O75022 631 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 EDN1P05305 212 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 HARSP12081 509 aaKnown RBP14.33□□□□□ -0.12
HDAC1-203ENST00000463172 EPCAMP16422 314 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 PROZP22891 400 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 OSTNP61366 133 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-203ENST00000463172 ARSHQ5FYA8 562 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 RARS2Q5T160 578 aaKnown RBP14.33□□□□□ -0.12
HDAC1-203ENST00000463172 KIAA0319Q5VV43 1072 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 DCLRE1AQ6PJP8 1040 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 CYP26C1Q6V0L0 522 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 SV2BQ7L1I2 683 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 HDAC7Q8WUI4 952 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 RIN2Q8WYP3 895 aaPredicted RBP14.33□□□□□ -0.12
HDAC1-203ENST00000463172 KCNN1Q92952 543 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 EPSTI1Q96J88 318 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 TTPALQ9BTX7 342 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 LRRC27Q9C0I9 530 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 EPHX3Q9H6B9 360 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 CHST7Q9NS84 486 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 BLOC1S4Q9NUP1 217 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 FNIP2Q9P278 1114 aa14.33□□□□□ -0.12
HDAC1-203ENST00000463172 NPHP3-ACAD11A0A0J9YXS1 232 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 SMIM28A0A1B0GU29 152 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 TMEM189-UBE2V1I3L0A0 370 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 HNRNPDLO14979 420 aaKnown RBP14.32□□□□□ -0.12
HDAC1-203ENST00000463172 TEX28O15482 410 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 GPR37L1O60883 481 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 B3GAT3O94766 335 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 STAT6P42226 847 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 ZNF131P52739 623 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 GRIN1Q05586 938 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 C15orf39Q6ZRI6 1047 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 TAS1R3Q7RTX0 852 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 CEP57Q86XR8 500 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 RNF135Q8IUD6 432 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
HDAC1-203ENST00000463172 USP28Q96RU2 1077 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 GPR62Q9BZJ7 368 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 PLEKHA4Q9H4M7 779 aa14.32□□□□□ -0.12
HDAC1-203ENST00000463172 SPTLC2O15270 562 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 XPOTO43592 962 aaKnown RBP14.31□□□□□ -0.12
HDAC1-203ENST00000463172 KIF4AO95239 1232 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 EFEMP2O95967 443 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 CLTAP09496 248 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 KCNE1P15382 129 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 GAP43P17677 238 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 RPL9P32969 192 aaKnown RBP14.31□□□□□ -0.12
HDAC1-203ENST00000463172 NASPP49321 788 aaPredicted RBP14.31□□□□□ -0.12
HDAC1-203ENST00000463172 MCL1Q07820 350 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 HERC4Q5GLZ8 1057 aaPredicted RBP14.31□□□□□ -0.12
HDAC1-203ENST00000463172 GLRA4Q5JXX5 417 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 SPECC1Q5M775 1068 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 FAM171A1Q5VUB5 890 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 ATL3Q6DD88 541 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 FAM173BQ6P4H8 233 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.31□□□□□ -0.12
HDAC1-203ENST00000463172 TAS1R1Q7RTX1 841 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 CMASQ8NFW8 434 aaPredicted RBP14.31□□□□□ -0.12
HDAC1-203ENST00000463172 HASPINQ8TF76 798 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 ACSF2Q96CM8 615 aaPredicted RBP14.31□□□□□ -0.12
HDAC1-203ENST00000463172 SNX27Q96L92 541 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 TSPAN18Q96SJ8 248 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 PLEKHA5Q9HAU0 1116 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 MAN1C1Q9NR34 630 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 TSHZ2Q9NRE2 1034 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 SEL1LQ9UBV2 794 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 TBX20Q9UMR3 447 aa14.31□□□□□ -0.12
HDAC1-203ENST00000463172 PPP6R2O75170 966 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 YEATS4O95619 227 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 ZSCAN22P10073 491 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-203ENST00000463172 NAB2Q15742 525 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 PSMD5Q16401 504 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 XKR4Q5GH76 650 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 SLFN12LQ6IEE8 588 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 ALKAL1Q6UXT8 129 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 TMC5Q6UXY8 1006 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 CCDC149Q6ZUS6 474 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 GPR149Q86SP6 731 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 PLCD3Q8N3E9 789 aa14.3□□□□□ -0.12
HDAC1-203ENST00000463172 CEP120Q8N960 986 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms