RNA–Protein interactions for RNA: ENST00000463053.1

CHKB-202, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-202ENST00000463053 GUCY2CP25092 1073 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 MCM2P49736 904 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 SLC12A3P55017 1021 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 NHLH1Q02575 133 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 RAD51AP2Q09MP3 1159 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 FAM171A1Q5VUB5 890 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 LARP1BQ659C4 914 aaKnown RBP18.38■□□□□ 0.53
CHKB-202ENST00000463053 ALKAL1Q6UXT8 129 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 CCDC149Q6ZUS6 474 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 PLCD3Q8N3E9 789 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 SYT2Q8N9I0 419 aaPredicted RBP18.38■□□□□ 0.53
CHKB-202ENST00000463053 LNX1Q8TBB1 728 aaPredicted RBP18.38■□□□□ 0.53
CHKB-202ENST00000463053 ZBTB45Q96K62 511 aaPredicted RBP18.38■□□□□ 0.53
CHKB-202ENST00000463053 CLSTN3Q9BQT9 956 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 UPF2Q9HAU5 1272 aaKnown RBP18.38■□□□□ 0.53
CHKB-202ENST00000463053 GOLGA2P5Q9HBQ8 144 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 KMT5AQ9NQR1 393 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHKB-202ENST00000463053 VWA8A3KMH1 1905 aa18.38■□□□□ 0.53
CHKB-202ENST00000463053 SF3B1O75533 1304 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHKB-202ENST00000463053 PROZP22891 400 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 GRM5P41594 1212 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 OSTNP61366 133 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 GRIN1Q05586 938 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 SOX4Q06945 474 aaPredicted RBP18.37■□□□□ 0.53
CHKB-202ENST00000463053 DMP1Q13316 513 aaPredicted RBP18.37■□□□□ 0.53
CHKB-202ENST00000463053 TMEM119Q4V9L6 283 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 ARSHQ5FYA8 562 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 XKR4Q5GH76 650 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 CEP57Q86XR8 500 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 HDAC7Q8WUI4 952 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 PIK3R5Q8WYR1 880 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 NTPCRQ9BSD7 190 aaKnown RBP18.37■□□□□ 0.53
CHKB-202ENST00000463053 TTPALQ9BTX7 342 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 NT5C3AQ9H0P0 336 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 KCNH6Q9H252 994 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 WDR6Q9NNW5 1121 aaKnown RBP18.37■□□□□ 0.53
CHKB-202ENST00000463053 PHLPP2Q6ZVD8 1323 aa18.37■□□□□ 0.53
CHKB-202ENST00000463053 SMIM28A0A1B0GU29 152 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 C1RP00736 705 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 PLA2G4BP0C869 781 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 CLCNKBP51801 687 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
CHKB-202ENST00000463053 MTMR3Q13615 1198 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 ARL6IP4Q66PJ3 421 aaKnown RBP18.36■□□□□ 0.53
CHKB-202ENST00000463053 OTOP3Q7RTS5 596 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 UBALD2Q8IYN6 164 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 C3orf58Q8NDZ4 430 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 SMG7Q92540 1137 aaKnown RBP18.36■□□□□ 0.53
CHKB-202ENST00000463053 DRC1Q96MC2 740 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 ZMAT2Q96NC0 199 aaKnown RBP18.36■□□□□ 0.53
CHKB-202ENST00000463053 MYADMQ96S97 322 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 MRPL4Q9BYD3 311 aaKnown RBP18.36■□□□□ 0.53
CHKB-202ENST00000463053 RHOBTB2Q9BYZ6 727 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 PLEKHA4Q9H4M7 779 aa18.36■□□□□ 0.53
CHKB-202ENST00000463053 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
CHKB-202ENST00000463053 CACNA1HO95180 2353 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 DOCK8Q8NF50 2099 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 KMT2EQ8IZD2 1858 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 AVPR2P30518 371 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 CUL4AQ13619 759 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 PSMD5Q16401 504 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 ZNF568Q3ZCX4 644 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 DCLRE1AQ6PJP8 1040 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 RSPO2Q6UXX9 243 aaPredicted RBP18.35■□□□□ 0.53
CHKB-202ENST00000463053 SUGP1Q8IWZ8 645 aaKnown RBP18.35■□□□□ 0.53
CHKB-202ENST00000463053 TMEM161BQ8NDZ6 487 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 SPIRE2Q8WWL2 714 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 ACSF2Q96CM8 615 aaPredicted RBP18.35■□□□□ 0.53
CHKB-202ENST00000463053 C17orf75Q9HAS0 396 aa18.35■□□□□ 0.53
CHKB-202ENST00000463053 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.35■□□□□ 0.53
CHKB-202ENST00000463053 CLUHO75153 1309 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 TMEM189-UBE2V1I3L0A0 370 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 I3L4J1 428 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 ZMYND10O75800 440 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 B3GAT3O94766 335 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 PLS3P13797 630 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 FGFR3P22607 806 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 BRCC3P46736 316 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 TCF15Q12870 199 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 UPP1Q16831 310 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 SEZ6Q53EL9 994 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 CYP26C1Q6V0L0 522 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 ALYREFQ86V81 257 aaKnown RBP18.34■□□□□ 0.53
CHKB-202ENST00000463053 TMEM130Q8N3G9 435 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 RSAD2Q8WXG1 361 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 SNX27Q96L92 541 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 TIPINQ9BVW5 301 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 CCDC94Q9BW85 323 aaPredicted RBP18.34■□□□□ 0.53
CHKB-202ENST00000463053 PRKD2Q9BZL6 878 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 HAPLN2Q9GZV7 340 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 KCNK12Q9HB15 430 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 BLOC1S4Q9NUP1 217 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 DPP7Q9UHL4 492 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 FBXW11Q9UKB1 542 aa18.34■□□□□ 0.53
CHKB-202ENST00000463053 MYH11P35749 1972 aa18.33■□□□□ 0.53
CHKB-202ENST00000463053 MAPTP10636 758 aaKnown RBP18.33■□□□□ 0.52
CHKB-202ENST00000463053 MCF2P10911 925 aa18.33■□□□□ 0.52
CHKB-202ENST00000463053 HARSP12081 509 aaKnown RBP18.33■□□□□ 0.52
CHKB-202ENST00000463053 CREMQ03060 361 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms