RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 ASNSP08243 561 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 HSPA5P11021 654 aaKnown RBP3.54□□□□□ -1.84
CD46-210ENST00000462968 CST5P28325 142 aaPredicted RBP3.54□□□□□ -1.84
CD46-210ENST00000462968 CASP7P55210 303 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 NANOS3P60323 173 aaKnown RBP3.54□□□□□ -1.84
CD46-210ENST00000462968 ERVK-21P61565 698 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 DMWDQ09019 674 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 PICALMQ13492 652 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 PTPROQ16827 1216 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 MIIPQ5JXC2 388 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 IGFL4Q6B9Z1 124 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 PKN3Q6P5Z2 889 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 CABP7Q86V35 215 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 PI4KAP1Q8N8J0 262 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 SHCBP1Q8NEM2 672 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 KCNG4Q8TDN1 519 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 SCLYQ96I15 445 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 RIPOR3Q96MK2 946 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 FCRL3Q96P31 734 aaPredicted RBP3.54□□□□□ -1.84
CD46-210ENST00000462968 CEP89Q96ST8 783 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 MTA3Q9BTC8 594 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 RSRP1Q9BUV0 290 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 CHMP4AQ9BY43 222 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 SEZ6LQ9BYH1 1024 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 WNT8AQ9H1J5 351 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 IKZF4Q9H2S9 585 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 SPC25Q9HBM1 224 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 GINM1Q9NU53 330 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 BTBD7Q9P203 1132 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 NUDT5Q9UKK9 219 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 MTUS1Q9ULD2 1270 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 FAM184BQ9ULE4 1060 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 CNPY2Q9Y2B0 182 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 TCAF1Q9Y4C2 921 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 CHD6Q8TD26 2715 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 RLFQ13129 1914 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 PRRC2BQ5JSZ5 2229 aaKnown RBP3.54□□□□□ -1.84
CD46-210ENST00000462968 DMDP11532 3685 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 PLXNB2O15031 1838 aa3.54□□□□□ -1.84
CD46-210ENST00000462968 RFX7Q2KHR2 1363 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 TRIOO75962 3097 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 DMXL1Q9Y485 3027 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 TNKSO95271 1327 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 MROH5Q6ZUA9 1318 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 LCHNA4D1U4 455 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 LOC730098B7Z3J9 87 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 DDX3XO00571 662 aaKnown RBP eCLIP3.53□□□□□ -1.84
CD46-210ENST00000462968 ZNF623O75123 536 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 DUSP11O75319 330 aaKnown RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 BAIAP3O94812 1187 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 C6orf222P0C671 652 aaPredicted RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 FCER1AP12319 257 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 NME1P15531 152 aaKnown RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 ERCC3P19447 782 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 PRDX5P30044 214 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 GBP2P32456 591 aaPredicted RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 RFC2P35250 354 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 LTBRP36941 435 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 NOP2P46087 812 aaKnown RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 DPTQ07507 201 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 FOXE3Q13461 319 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 RRP1BQ14684 758 aaKnown RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 LMBR1LQ6UX01 489 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 CATSPERGQ6ZRH7 1159 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 DEFB128Q7Z7B8 93 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 SLC43A3Q8NBI5 491 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 C12orf42Q96LP6 360 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 TINF2Q9BSI4 451 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 MOV10L1Q9BXT6 1211 aaKnown RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 MROH8Q9H579 483 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 MYH16Q9H6N6 1097 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 DDX4Q9NQI0 724 aaKnown RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 CLDND1Q9NY35 253 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 HOXC10Q9NYD6 342 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 HERC5Q9UII4 1024 aaKnown RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 DIS3Q9Y2L1 958 aaKnown RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 LAS1LQ9Y4W2 734 aaKnown RBP3.53□□□□□ -1.84
CD46-210ENST00000462968 VPS13AQ96RL7 3174 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 NCOR2Q9Y618 2525 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 PLXNA1Q9UIW2 1896 aa3.53□□□□□ -1.84
CD46-210ENST00000462968 KIF16BQ96L93 1317 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 LINC01553A4QN01 128 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 MYADML2A6NDP7 307 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 C9IYK1 514 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 B4GALT4O60513 344 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 PPP1R11O60927 126 aaPredicted RBP3.52□□□□□ -1.85
CD46-210ENST00000462968 CABYRO75952 493 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 PDGFBP01127 241 aaPredicted RBP3.52□□□□□ -1.85
CD46-210ENST00000462968 SUPT20HL2P0C7V6 817 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 IFNGR1P15260 489 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 ZNF28P17035 718 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 PPP2R1AP30153 589 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 ICAM3P32942 547 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 KCNJ6P48051 423 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 ATXN1P54253 815 aaKnown RBP3.52□□□□□ -1.85
CD46-210ENST00000462968 USP14P54578 494 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 ITGA1P56199 1179 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 ZNF445P59923 1031 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 PPP2CBP62714 309 aa3.52□□□□□ -1.85
CD46-210ENST00000462968 PPP2CAP67775 309 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms