RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 CMTR2Q8IYT2 770 aaKnown RBP20.92■□□□□ 0.94
XPA-202ENST00000462523 ABI1Q8IZP0 508 aa20.92■□□□□ 0.94
XPA-202ENST00000462523 XXYLT1Q8NBI6 393 aa20.92■□□□□ 0.94
XPA-202ENST00000462523 EEF2KMTQ96G04 330 aa20.92■□□□□ 0.94
XPA-202ENST00000462523 ZMAT2Q96NC0 199 aaKnown RBP20.92■□□□□ 0.94
XPA-202ENST00000462523 TBC1D13Q9NVG8 400 aa20.92■□□□□ 0.94
XPA-202ENST00000462523 CNTN3Q9P232 1028 aa20.92■□□□□ 0.94
XPA-202ENST00000462523 SOX1O00570 391 aaPredicted RBP20.91■□□□□ 0.94
XPA-202ENST00000462523 KIAA0391O15091 583 aaKnown RBP20.91■□□□□ 0.94
XPA-202ENST00000462523 NR2F2P24468 414 aa20.91■□□□□ 0.94
XPA-202ENST00000462523 PPP1R2P41236 205 aa20.91■□□□□ 0.94
XPA-202ENST00000462523 CASP4P49662 377 aa20.91■□□□□ 0.94
XPA-202ENST00000462523 PAK1Q13153 545 aa20.91■□□□□ 0.94
XPA-202ENST00000462523 BTG3Q14201 252 aaPredicted RBP20.91■□□□□ 0.94
XPA-202ENST00000462523 NAB2Q15742 525 aa20.91■□□□□ 0.94
XPA-202ENST00000462523 KYAT1Q16773 422 aa20.91■□□□□ 0.94
XPA-202ENST00000462523 GLRA4Q5JXX5 417 aa20.91■□□□□ 0.94
XPA-202ENST00000462523 ZC3H3Q8IXZ2 948 aaKnown RBP20.91■□□□□ 0.94
XPA-202ENST00000462523 NOC3LQ8WTT2 800 aaKnown RBP20.91■□□□□ 0.94
XPA-202ENST00000462523 DUSP9Q99956 384 aaKnown RBP20.91■□□□□ 0.94
XPA-202ENST00000462523 CWH43Q9H720 699 aa20.91■□□□□ 0.94
XPA-202ENST00000462523 MRPL42Q9Y6G3 142 aaKnown RBP20.91■□□□□ 0.94
XPA-202ENST00000462523 LACTBL1A8MY62 500 aa20.9■□□□□ 0.94
XPA-202ENST00000462523 LDHAP00338 332 aaKnown RBP20.9■□□□□ 0.94
XPA-202ENST00000462523 YARSP54577 528 aaKnown RBP20.9■□□□□ 0.94
XPA-202ENST00000462523 STX17P56962 302 aa20.9■□□□□ 0.94
XPA-202ENST00000462523 LRRC63Q05C16 580 aa20.9■□□□□ 0.94
XPA-202ENST00000462523 SNRNP35Q16560 246 aaKnown RBP20.9■□□□□ 0.94
XPA-202ENST00000462523 ZNF280BQ86YH2 543 aa20.9■□□□□ 0.94
XPA-202ENST00000462523 RDH13Q8NBN7 331 aa20.9■□□□□ 0.94
XPA-202ENST00000462523 FUCA2Q9BTY2 467 aa20.9■□□□□ 0.94
XPA-202ENST00000462523 RPF1Q9H9Y2 349 aaKnown RBP20.9■□□□□ 0.94
XPA-202ENST00000462523 TOPORSQ9NS56 1045 aaPredicted RBP20.9■□□□□ 0.94
XPA-202ENST00000462523 NLRC5Q86WI3 1866 aa20.9■□□□□ 0.94
XPA-202ENST00000462523 SMIM28A0A1B0GU29 152 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 SYCE3A1L190 88 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 LINC01553A4QN01 128 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 EXOC3O60645 756 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 DDHD2O94830 711 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 DNAJB2P25686 324 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 SPAG1Q07617 926 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 MYBPC2Q14324 1141 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 ZSCAN23Q3MJ62 389 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 SASS6Q6UVJ0 657 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 BRSK2Q8IWQ3 736 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 LRRC43Q8N309 656 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 TMEM130Q8N3G9 435 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 PPP1R10Q96QC0 940 aaKnown RBP20.89■□□□□ 0.94
XPA-202ENST00000462523 GZF1Q9H116 711 aaPredicted RBP20.89■□□□□ 0.94
XPA-202ENST00000462523 NKX2-4Q9H2Z4 354 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 PLEKHA5Q9HAU0 1116 aa20.89■□□□□ 0.94
XPA-202ENST00000462523 RBAKQ9NYW8 714 aaPredicted RBP20.89■□□□□ 0.94
XPA-202ENST00000462523 TRANK1O15050 2925 aa20.89■□□□□ 0.93
XPA-202ENST00000462523 AKAP3O75969 853 aa20.89■□□□□ 0.93
XPA-202ENST00000462523 KCNE1P15382 129 aa20.89■□□□□ 0.93
XPA-202ENST00000462523 POU5F1Q01860 360 aaKnown RBP20.89■□□□□ 0.93
XPA-202ENST00000462523 TYRO3Q06418 890 aa20.89■□□□□ 0.93
XPA-202ENST00000462523 C11orf57Q6ZUT1 292 aaPredicted RBP20.89■□□□□ 0.93
XPA-202ENST00000462523 URGCPQ8TCY9 931 aa20.89■□□□□ 0.93
XPA-202ENST00000462523 RSPH1Q8WYR4 309 aa20.89■□□□□ 0.93
XPA-202ENST00000462523 DNAJB4Q9UDY4 337 aa20.89■□□□□ 0.93
XPA-202ENST00000462523 RWDD2AQ9UIY3 292 aa20.89■□□□□ 0.93
XPA-202ENST00000462523 ZNF233A6NK53 670 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 TAP1Q03518 808 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 PPP2R3AQ06190 1150 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 SOX4Q06945 474 aaPredicted RBP20.88■□□□□ 0.93
XPA-202ENST00000462523 DSC1Q08554 894 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 GRIK3Q13003 919 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 ADAM9Q13443 819 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 RAB30Q15771 203 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 FOXR2Q6PJQ5 311 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 PLEKHO2Q8TD55 490 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 CLP1Q92989 425 aaKnown RBP20.88■□□□□ 0.93
XPA-202ENST00000462523 FAM212AQ96EL1 285 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 FAM84AQ96KN4 292 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 RPS6KC1Q96S38 1066 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 TSG101Q99816 390 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 MRPL9Q9BYD2 267 aaKnown RBP20.88■□□□□ 0.93
XPA-202ENST00000462523 NRDE2Q9H7Z3 1164 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 KIAA1586Q9HCI6 787 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 CACNG4Q9UBN1 327 aa20.88■□□□□ 0.93
XPA-202ENST00000462523 NFICP08651 508 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 CYP24A1Q07973 514 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 ZBTB6Q15916 424 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 STX1AQ16623 288 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 CEP135Q66GS9 1140 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 JADE1Q6IE81 842 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 EFCAB13Q8IY85 973 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 FIBCD1Q8N539 461 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 C18orf25Q96B23 403 aaPredicted RBP20.87■□□□□ 0.93
XPA-202ENST00000462523 MFSD14AQ96MC6 490 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 PDE11AQ9HCR9 933 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 KANSL3Q9P2N6 904 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 MSRAQ9UJ68 235 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 PTPRJQ12913 1337 aa20.87■□□□□ 0.93
XPA-202ENST00000462523 LETM1O95202 739 aaPredicted RBP20.86■□□□□ 0.93
XPA-202ENST00000462523 THP07101 528 aa20.86■□□□□ 0.93
XPA-202ENST00000462523 RPL13P26373 211 aaKnown RBP20.86■□□□□ 0.93
XPA-202ENST00000462523 PBX3P40426 434 aa20.86■□□□□ 0.93
XPA-202ENST00000462523 FKBP3Q00688 224 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms