RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SYT2Q8N9I0 419 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-207ENST00000461798 SPIRE2Q8WWL2 714 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 KCNN1Q92952 543 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 ASIC4Q96FT7 647 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 DRC1Q96MC2 740 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 KIFC3Q9BVG8 833 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 PLEKHA4Q9H4M7 779 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 ARHGAP28Q9P2N2 729 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 SMC3Q9UQE7 1217 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 USP20Q9Y2K6 914 aa10.08□□□□□ -0.8
BRCA1-207ENST00000461798 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-207ENST00000461798 TMEM189-UBE2V1I3L0A0 370 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 C2CD2LO14523 706 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 HIP1RO75146 1068 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 BRD1O95696 1058 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 GLUD1P00367 558 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 WEE2P0C1S8 567 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 PROZP22891 400 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 PEX3P56589 373 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 ELAVL2Q12926 359 aaKnown RBP10.07□□□□□ -0.8
BRCA1-207ENST00000461798 CUL4AQ13619 759 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 LARP1BQ659C4 914 aaKnown RBP10.07□□□□□ -0.8
BRCA1-207ENST00000461798 DCLRE1AQ6PJP8 1040 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 ALKAL1Q6UXT8 129 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 OTOP3Q7RTS5 596 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 TAS1R3Q7RTX0 852 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 PIK3R5Q8WYR1 880 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 PBXIP1Q96AQ6 731 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 AK8Q96MA6 479 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 PPP1R10Q96QC0 940 aaKnown RBP10.07□□□□□ -0.8
BRCA1-207ENST00000461798 ACO2Q99798 780 aaKnown RBP10.07□□□□□ -0.8
BRCA1-207ENST00000461798 PAAF1Q9BRP4 392 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 RUSC1Q9BVN2 902 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 NT5C3AQ9H0P0 336 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 CXCL16Q9H2A7 254 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 KCND2Q9NZV8 630 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 SORCS3Q9UPU3 1222 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 MUC6Q6W4X9 2439 aa10.07□□□□□ -0.8
BRCA1-207ENST00000461798 SF3B1O75533 1304 aaKnown RBP eCLIP10.07□□□□□ -0.82e-9■■■■■ 90.5
BRCA1-207ENST00000461798 CCDC169A6NNP5 214 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 ABLIM1O14639 778 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 LIG1P18858 919 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 GRM5P41594 1212 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 SLC12A3P55017 1021 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 DMP1Q13316 513 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-207ENST00000461798 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 TMEM119Q4V9L6 283 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 RTP2Q5QGT7 225 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 CD300LGQ6UXG3 332 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 FBXL6Q8N531 539 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 TDRD5Q8NAT2 981 aaKnown RBP10.06□□□□□ -0.8
BRCA1-207ENST00000461798 KREMEN2Q8NCW0 462 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 LNX1Q8TBB1 728 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-207ENST00000461798 FEZF2Q8TBJ5 459 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 RIN2Q8WYP3 895 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-207ENST00000461798 RABGGTAQ92696 567 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 ACSF2Q96CM8 615 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-207ENST00000461798 UROC1Q96N76 676 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 TTPALQ9BTX7 342 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 MRPL4Q9BYD3 311 aaKnown RBP10.06□□□□□ -0.8
BRCA1-207ENST00000461798 WDR6Q9NNW5 1121 aaKnown RBP10.06□□□□□ -0.8
BRCA1-207ENST00000461798 KMT5AQ9NQR1 393 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 MAN1C1Q9NR34 630 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 TSHZ2Q9NRE2 1034 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 ZDHHC7Q9NXF8 308 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 C5orf42Q9H799 3197 aa10.06□□□□□ -0.8
BRCA1-207ENST00000461798 PIEZO1Q92508 2521 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 SMIM28A0A1B0GU29 152 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 CCDC195A0A1B0GUA6 201 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 VWA3AA6NCI4 1184 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 CASTOR2A6NHX0 329 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 SFI1A8K8P3 1242 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 TGM5O43548 720 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 KIF4AO95239 1232 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 BMP15O95972 392 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 PLA2G4BP0C869 781 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 MCF2P10911 925 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 PLS3P13797 630 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 KCNE1P15382 129 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 FGFR3P22607 806 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 SMTNP53814 917 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 MTMR3Q13615 1198 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 ARSHQ5FYA8 562 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 FAM171A1Q5VUB5 890 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 PDXDC1Q6P996 788 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 CCDC149Q6ZUS6 474 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 BRAPQ7Z569 592 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 PALB2Q86YC2 1186 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 TMEM161BQ8NDZ6 487 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 ZNF707Q96C28 371 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-207ENST00000461798 DDX27Q96GQ7 796 aaKnown RBP10.05□□□□□ -0.8
BRCA1-207ENST00000461798 B3GALT6Q96L58 329 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 PRRX2Q99811 253 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 CLSTN3Q9BQT9 956 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 CCDC94Q9BW85 323 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-207ENST00000461798 TARS2Q9BW92 718 aaKnown RBP10.05□□□□□ -0.8
BRCA1-207ENST00000461798 PRKD2Q9BZL6 878 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 CDT1Q9H211 546 aa10.05□□□□□ -0.8
BRCA1-207ENST00000461798 CACNG4Q9UBN1 327 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms