RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 SYT2Q8N9I0 419 aaPredicted RBP15.31■□□□□ 0.04
USP4-206ENST00000461553 ACSF2Q96CM8 615 aaPredicted RBP15.31■□□□□ 0.04
USP4-206ENST00000461553 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 PLIN2Q99541 437 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 ACO2Q99798 780 aaKnown RBP15.31■□□□□ 0.04
USP4-206ENST00000461553 FNIP2Q9P278 1114 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 KCNG1Q9UIX4 513 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 SORCS3Q9UPU3 1222 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 PIEZO1Q92508 2521 aa15.31■□□□□ 0.04
USP4-206ENST00000461553 PLA2G4BP0C869 781 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 HARSP12081 509 aaKnown RBP15.3■□□□□ 0.04
USP4-206ENST00000461553 PLS3P13797 630 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 PDCP20941 246 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 SMTNP53814 917 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 SLC12A3P55017 1021 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 NAB2Q15742 525 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 PSMD5Q16401 504 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 RTP2Q5QGT7 225 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 FAM171A1Q5VUB5 890 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 PDXDC1Q6P996 788 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 MPZL3Q6UWV2 235 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 OTOP3Q7RTS5 596 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 TAS1R3Q7RTX0 852 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 BMP8AQ7Z5Y6 402 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 CEP57Q86XR8 500 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 ZDHHC14Q8IZN3 488 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 CEP120Q8N960 986 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 KREMEN2Q8NCW0 462 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 HDAC7Q8WUI4 952 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 STAMQ92783 540 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 PBXIP1Q96AQ6 731 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 UROC1Q96N76 676 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 TTPALQ9BTX7 342 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 KCNH6Q9H252 994 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 ANKFY1Q9P2R3 1169 aa15.3■□□□□ 0.04
USP4-206ENST00000461553 CLUHO75153 1309 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 H0YCG3 227 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 TMEM189-UBE2V1I3L0A0 370 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 TGM5O43548 720 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 C1RP00736 705 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 MCF2P10911 925 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 RPL17P18621 184 aaKnown RBP15.29■□□□□ 0.04
USP4-206ENST00000461553 UBA7P41226 1012 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 OSTNP61366 133 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 CUL4AQ13619 759 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 NOLC1Q14978 699 aaKnown RBP eCLIP15.29■□□□□ 0.04
USP4-206ENST00000461553 PRSS55Q6UWB4 352 aaPredicted RBP15.29■□□□□ 0.04
USP4-206ENST00000461553 CYP26C1Q6V0L0 522 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.29■□□□□ 0.04
USP4-206ENST00000461553 PALB2Q86YC2 1186 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 UBALD2Q8IYN6 164 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 FEZF2Q8TBJ5 459 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 SPIRE2Q8WWL2 714 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 PIK3R5Q8WYR1 880 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 SMG7Q92540 1137 aaKnown RBP15.29■□□□□ 0.04
USP4-206ENST00000461553 PPP1R10Q96QC0 940 aaKnown RBP15.29■□□□□ 0.04
USP4-206ENST00000461553 TCHPQ9BT92 498 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 TARS2Q9BW92 718 aaKnown RBP15.29■□□□□ 0.04
USP4-206ENST00000461553 RHOBTB2Q9BYZ6 727 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 CXCL16Q9H2A7 254 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 SLC38A7Q9NVC3 462 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 LARSQ9P2J5 1176 aaKnown RBP15.29■□□□□ 0.04
USP4-206ENST00000461553 ANK1P16157 1881 aa15.29■□□□□ 0.04
USP4-206ENST00000461553 CCDC195A0A1B0GUA6 201 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 SFI1A8K8P3 1242 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 B3GAT3O94766 335 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 ASGR2P07307 311 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 MYBP10242 640 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 PROZP22891 400 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 LONP1P36776 959 aaKnown RBP15.28■□□□□ 0.04
USP4-206ENST00000461553 CACNB1Q02641 598 aaPredicted RBP15.28■□□□□ 0.04
USP4-206ENST00000461553 SF3A1Q15459 793 aaKnown RBP15.28■□□□□ 0.04
USP4-206ENST00000461553 LIN9Q5TKA1 542 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 GPBP1Q86WP2 473 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 FBXL6Q8N531 539 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 TMEM161BQ8NDZ6 487 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 ASIC4Q96FT7 647 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 BICD1Q96G01 975 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 SNX27Q96L92 541 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 PIDD1Q9HB75 910 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 PTPRHQ9HD43 1115 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 ZDHHC7Q9NXF8 308 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 ODF2LQ9ULJ1 636 aa15.28■□□□□ 0.04
USP4-206ENST00000461553 TCHHQ07283 1943 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 K7ENM7 598 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 TOM1L1O75674 476 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 RFPL2O75678 378 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 FAM13AO94988 1023 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 BRD1O95696 1058 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 KRT18P05783 430 aaKnown RBP15.27■□□□□ 0.04
USP4-206ENST00000461553 SPATA31D3P0C874 917 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 MAPTP10636 758 aaKnown RBP15.27■□□□□ 0.04
USP4-206ENST00000461553 MATR3P43243 847 aaKnown RBP eCLIP15.27■□□□□ 0.04
USP4-206ENST00000461553 CLCNKBP51801 687 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 SPATA31D4Q6ZUB0 917 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 GOLGA2P5Q9HBQ8 144 aa15.27■□□□□ 0.04
USP4-206ENST00000461553 WDR6Q9NNW5 1121 aaKnown RBP15.27■□□□□ 0.04
USP4-206ENST00000461553 LIMD1Q9UGP4 676 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms