RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 FANCCQ00597 558 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 POU5F1Q01860 360 aaKnown RBP10.6□□□□□ -0.71
C9orf78-203ENST00000461539 SURF1Q15526 300 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 SLC10A6Q3KNW5 377 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 LMBRD2Q68DH5 695 aaPredicted RBP10.6□□□□□ -0.71
C9orf78-203ENST00000461539 PSRC1Q6PGN9 363 aaPredicted RBP10.6□□□□□ -0.71
C9orf78-203ENST00000461539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.6□□□□□ -0.718e-7■□□□□ 9.2
C9orf78-203ENST00000461539 AGMOQ6ZNB7 445 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 ZNF365Q70YC5 407 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 C16orf59Q7L2K0 433 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 TRIM59Q8IWR1 403 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 PLEKHO2Q8TD55 490 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 PARD3BQ8TEW8 1205 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 SNX27Q96L92 541 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 RPS6KC1Q96S38 1066 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 GAD1Q99259 594 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 POP1Q99575 1024 aaKnown RBP10.6□□□□□ -0.71
C9orf78-203ENST00000461539 TUBGCP2Q9BSJ2 902 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 VPS16Q9H269 839 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 MMRN2Q9H8L6 949 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 RSAD1Q9HA92 442 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 PLEKHA5Q9HAU0 1116 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 UBN1Q9NPG3 1134 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
C9orf78-203ENST00000461539 TMEM161AQ9NX61 479 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 LIMA1Q9UHB6 759 aaKnown RBP10.6□□□□□ -0.71
C9orf78-203ENST00000461539 INPP5FQ9Y2H2 1132 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 GIT1Q9Y2X7 761 aa10.6□□□□□ -0.71
C9orf78-203ENST00000461539 CENPFP49454 3210 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 TTC26A0AVF1 554 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 LRRIQ3A6PVS8 624 aaPredicted RBP10.59□□□□□ -0.71
C9orf78-203ENST00000461539 MEFVO15553 781 aaPredicted RBP10.59□□□□□ -0.71
C9orf78-203ENST00000461539 STX10O60499 249 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 BAIAP3O94812 1187 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 UPP2O95045 317 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 AFPP02771 609 aaKnown RBP10.59□□□□□ -0.71
C9orf78-203ENST00000461539 FGFR1P11362 822 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 KCNJ6P48051 423 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 COPB1P53618 953 aaKnown RBP10.59□□□□□ -0.71
C9orf78-203ENST00000461539 TFAMQ00059 246 aaKnown RBP10.59□□□□□ -0.71
C9orf78-203ENST00000461539 GSE1Q14687 1217 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 MAN2A1Q16706 1144 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 UVSSAQ2YD98 709 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 FILIP1LQ4L180 1135 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 GLRA4Q5JXX5 417 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 TMEM240Q5SV17 173 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 JADE1Q6IE81 842 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 GLB1LQ6UWU2 654 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 ZNF598Q86UK7 904 aaKnown RBP10.59□□□□□ -0.71
C9orf78-203ENST00000461539 NPAS4Q8IUM7 802 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 CD302Q8IX05 232 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 ABI1Q8IZP0 508 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 KIF12Q96FN5 646 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 CGRRF1Q99675 332 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.59□□□□□ -0.71
C9orf78-203ENST00000461539 ASB7Q9H672 318 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 ELAC1Q9H777 363 aaKnown RBP10.59□□□□□ -0.71
C9orf78-203ENST00000461539 RNF19AQ9NV58 838 aa10.59□□□□□ -0.71
C9orf78-203ENST00000461539 MYH9P35579 1960 aaKnown RBP10.59□□□□□ -0.71
C9orf78-203ENST00000461539 SMIM28A0A1B0GU29 152 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 HOXA2O43364 376 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 OFD1O75665 1012 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 NFICP08651 508 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 TMEM191BP0C7N4 346 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 MAGEA10P43363 369 aaPredicted RBP10.58□□□□□ -0.72
C9orf78-203ENST00000461539 GCLMP48507 274 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 SCNN1GP51170 649 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 WDR5P61964 334 aaKnown RBP10.58□□□□□ -0.72
C9orf78-203ENST00000461539 DEFB103AP81534 67 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 ENPEPQ07075 957 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 PPP3CAQ08209 521 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 KCNH2Q12809 1159 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 BIRC3Q13489 604 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 TMEM132DQ14C87 1099 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 DUOXA2Q1HG44 320 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 VWA3BQ502W6 1294 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 FKBP15Q5T1M5 1219 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 FAM117BQ6P1L5 589 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 WDR49Q8IV35 697 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 EFCAB13Q8IY85 973 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 HELQQ8TDG4 1101 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 SLC35C1Q96A29 364 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 ANKRD36BP1Q96IX9 119 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 FAM84AQ96KN4 292 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 ZFP42Q96MM3 310 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 CXCL16Q9H2A7 254 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 MTIF3Q9H2K0 278 aaKnown RBP10.58□□□□□ -0.72
C9orf78-203ENST00000461539 NDST4Q9H3R1 872 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 IFNKQ9P0W0 207 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 CNTN3Q9P232 1028 aa10.58□□□□□ -0.72
C9orf78-203ENST00000461539 ARID2Q68CP9 1835 aa10.57□□□□□ -0.72
C9orf78-203ENST00000461539 FSD2A1L4K1 749 aa10.57□□□□□ -0.72
C9orf78-203ENST00000461539 ARL5CA6NH57 179 aa10.57□□□□□ -0.72
C9orf78-203ENST00000461539 LRRC10BA6NIK2 292 aa10.57□□□□□ -0.72
C9orf78-203ENST00000461539 LGALS16A8MUM7 142 aa10.57□□□□□ -0.72
C9orf78-203ENST00000461539 N4BP1O75113 896 aaKnown RBP10.57□□□□□ -0.72
C9orf78-203ENST00000461539 PHACTR2O75167 634 aa10.57□□□□□ -0.72
C9orf78-203ENST00000461539 POMCP01189 267 aa10.57□□□□□ -0.72
C9orf78-203ENST00000461539 TNNC2P02585 160 aa10.57□□□□□ -0.72
C9orf78-203ENST00000461539 KCNE1P15382 129 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms