RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 CT47A1Q5JQC4 288 aaPredicted RBP9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 RTP2Q5QGT7 225 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 IFIT1BQ5T764 474 aaKnown RBP9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 NBPF11Q86T75 865 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 CCDC103Q8IW40 242 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 IL17RAQ96F46 866 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 MTA3Q9BTC8 594 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 MOV10L1Q9BXT6 1211 aaKnown RBP9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 MCOLN1Q9GZU1 580 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 UBA5Q9GZZ9 404 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 SPATC1LQ9H0A9 340 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 KAT14Q9H8E8 782 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 SLC38A10Q9HBR0 1119 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 METTL14Q9HCE5 456 aaKnown RBP9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 TPSG1Q9NRR2 321 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 MAD2L2Q9UI95 211 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 TRIM17Q9Y577 477 aa9.28□□□□□ -0.92
ECHDC1-212ENST00000461239 PLXNB2O15031 1838 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 COL11A1P12107 1806 aaPredicted RBP9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 OPA1O60313 960 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 CRTAMO95727 393 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 CEACAM5P06731 702 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 PDGFRBP09619 1106 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 ZKSCAN1P17029 563 aaPredicted RBP9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 NOP2P46087 812 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 STAT2P52630 851 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 PRKCZQ05513 592 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 WTAPQ15007 396 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 PCBP1Q15365 356 aaKnown RBP eCLIP9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 CDKAL1Q5VV42 579 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 PKN3Q6P5Z2 889 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 STRA8Q7Z7C7 330 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 USP6NLQ92738 828 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 MAGEB10Q96LZ2 347 aaPredicted RBP9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 JAKMIP1Q96N16 626 aaKnown RBP9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 MYL10Q9BUA6 226 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 SRRDQ9UH36 339 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 PLAGL2Q9UPG8 496 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 PTPN22Q9Y2R2 807 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 WDR19Q8NEZ3 1342 aa9.27□□□□□ -0.93
ECHDC1-212ENST00000461239 MGAMO43451 1857 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 AQP7O14520 342 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 ATP2A1O14983 1001 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 CYTH3O43739 400 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 ITGB2P05107 769 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 RPS6KB1P23443 525 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 LIFRP42702 1097 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 KRT32Q14532 448 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 GRM4Q14833 912 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 CCDC96Q2M329 555 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 SYDE2Q5VT97 1194 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 E4F1Q66K89 784 aaPredicted RBP9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 RSPO2Q6UXX9 243 aaPredicted RBP9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 GPR142Q7Z601 462 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 FAM160B2Q86V87 743 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 SGMS1Q86VZ5 419 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 RIOX2Q8IUF8 465 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 AHI1Q8N157 1196 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 MB21D1Q8N884 522 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 CHURC1Q8WUH1 139 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 ZFYVE21Q9BQ24 234 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 PHF20Q9BVI0 1012 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 KRTAP9-2Q9BYQ4 174 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 AGXT2Q9BYV1 514 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 RANBP17Q9H2T7 1088 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 RAVER2Q9HCJ3 691 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 HOMER2Q9NSB8 354 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 PCDHA9Q9Y5H5 950 aa9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 MKI67P46013 3256 aaKnown RBP9.26□□□□□ -0.93
ECHDC1-212ENST00000461239 H3BS24 57 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 TNPO2O14787 897 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 MEFVO15553 781 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 EYA4O95677 639 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 SYPP08247 313 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 PLS3P13797 630 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 RXRAP19793 462 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 CASTP20810 708 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 TPP2P29144 1249 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 FLT3LGP49771 235 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 SEPHS1P49903 392 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 CLCN7P51798 805 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 TOB2Q14106 344 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 PLS1Q14651 629 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 KIF22Q14807 665 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 SEPT7Q16181 437 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 GPATCH4Q5T3I0 446 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 EEF1DP3Q658K8 133 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 FBXO46Q6PJ61 603 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 Q6ZUG5 572 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 THAP5Q7Z6K1 395 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 RAB11FIP4Q86YS3 637 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 ADGRF4Q8IZF3 695 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 FBXL16Q8N461 479 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 SHCBP1Q8NEM2 672 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 SHKBP1Q8TBC3 707 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 MTMR8Q96EF0 704 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 HSPA12BQ96MM6 686 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 UPF3BQ9BZI7 483 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 TM6SF1Q9BZW5 370 aa9.25□□□□□ -0.93
ECHDC1-212ENST00000461239 JMJD4Q9H9V9 463 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms