RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 LRRC14Q15048 493 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 FKBP9P1Q75LS8 142 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 RFWD2Q8NHY2 731 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 PIGOQ8TEQ8 1089 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 TNIP3Q96KP6 325 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 RBBP8Q99708 897 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 EXOSC4Q9NPD3 245 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 TSC22D4Q9Y3Q8 395 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 SLC16A4O15374 487 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ATP9BO43861 1147 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ASMTLO95671 621 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 TPI1P60174 286 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ZNF211Q13398 564 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 TTLL4Q14679 1199 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 STILQ15468 1287 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 C6orf10Q5SRN2 563 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 NUP93Q8N1F7 819 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 GPD1LQ8N335 351 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 PGBD4Q96DM1 585 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 DMAP1Q9NPF5 467 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 C6orf203Q9P0P8 240 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 CDYLQ9Y232 598 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 KIAA0391O15091 583 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 HSPA13P48723 471 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 EIF3EP60228 445 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 FAM83BQ5T0W9 1011 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 CIAPIN1Q6FI81 312 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 LRIG3Q6UXM1 1119 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 P3H2Q8IVL5 708 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ATL2Q8NHH9 583 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 NSUN6Q8TEA1 469 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 DIS3LQ8TF46 1054 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 INPP5DQ92835 1189 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 COA1Q9GZY4 146 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 DDX47Q9H0S4 455 aaKnown RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 KRCC1Q9NPI7 259 aaPredicted RBP9.47□□□□□ -0.89
BRCA1-205ENST00000461221 ARHGEF38Q9NXL2 777 aa9.47□□□□□ -0.89
BRCA1-205ENST00000461221 F5H423 210 aaPredicted RBP9.46□□□□□ -0.89
BRCA1-205ENST00000461221 PRKAB2O43741 272 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 P4HBP07237 508 aaKnown RBP9.46□□□□□ -0.89
BRCA1-205ENST00000461221 CPB1P15086 417 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 GYS2P54840 703 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 ST8SIA6P61647 398 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 MRPS25P82663 173 aaKnown RBP9.46□□□□□ -0.89
BRCA1-205ENST00000461221 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.46□□□□□ -0.89
BRCA1-205ENST00000461221 KLC1Q07866 573 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 STX3Q13277 289 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 P3H1Q32P28 736 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 RHPN2Q8IUC4 686 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 RCOR2Q8IZ40 523 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 RTKN2Q8IZC4 609 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.89
BRCA1-205ENST00000461221 TMA16Q96EY4 203 aaKnown RBP9.46□□□□□ -0.89
BRCA1-205ENST00000461221 USE1Q9NZ43 259 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 FBXL5Q9UKA1 691 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 MAPKBP1O60336 1514 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 ALDH1A1P00352 501 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 SERPIND1P05546 499 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 ATP1A3P13637 1013 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 COPB2P35606 906 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 KDSRQ06136 332 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 NFRKBQ6P4R8 1299 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 KRT78Q8N1N4 520 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 IL17REQ8NFR9 667 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 DYNLL2Q96FJ2 89 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 VPS50Q96JG6 964 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 RMDN3Q96TC7 470 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 GINS4Q9BRT9 223 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 YIPF2Q9BWQ6 316 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 SMARCAD1Q9H4L7 1026 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 RIC8BQ9NVN3 520 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.46□□□□□ -0.894e-6■■■■■ 27.4
BRCA1-205ENST00000461221 LSM7Q9UK45 103 aaKnown RBP9.46□□□□□ -0.89
BRCA1-205ENST00000461221 ABT1Q9ULW3 272 aaKnown RBP9.46□□□□□ -0.89
BRCA1-205ENST00000461221 ZHX2Q9Y6X8 837 aa9.46□□□□□ -0.89
BRCA1-205ENST00000461221 KCNQ3O43525 872 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 CYTH3O43739 400 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 ST13P50502 369 aaKnown RBP9.46□□□□□ -0.9
BRCA1-205ENST00000461221 CSTF3Q12996 717 aaKnown RBP9.46□□□□□ -0.9
BRCA1-205ENST00000461221 BYSLQ13895 437 aaKnown RBP9.46□□□□□ -0.9
BRCA1-205ENST00000461221 MIGA2Q7L4E1 593 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 LONP2Q86WA8 852 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 VPS37AQ8NEZ2 397 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 CALML6Q8TD86 181 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 FAM217BQ9NTX9 383 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-205ENST00000461221 SYBUQ9NX95 663 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 DTNAQ9Y4J8 743 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 SNTNA6NMZ2 147 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 CLASP2O75122 1294 aaKnown RBP9.46□□□□□ -0.9
BRCA1-205ENST00000461221 KCNA3P22001 575 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 RFX8Q6ZV50 586 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 ADCK2Q7Z695 626 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 ST13P5Q8NFI4 369 aaPredicted RBP9.46□□□□□ -0.9
BRCA1-205ENST00000461221 RSPH1Q8WYR4 309 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 ELMO2Q96JJ3 720 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 TLR7Q9NYK1 1049 aaKnown RBP9.46□□□□□ -0.9
BRCA1-205ENST00000461221 HDAC6Q9UBN7 1215 aa9.46□□□□□ -0.9
BRCA1-205ENST00000461221 MYL2P10916 166 aa9.45□□□□□ -0.9
BRCA1-205ENST00000461221 PLA2G4AP47712 749 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms