RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CACNG4Q9UBN1 327 aa24.62■■□□□ 1.53
TRAF4-207ENST00000461195 ADAM28Q9UKQ2 775 aa24.62■■□□□ 1.53
TRAF4-207ENST00000461195 SSX2IPQ9Y2D8 614 aa24.62■■□□□ 1.53
TRAF4-207ENST00000461195 HCFC2Q9Y5Z7 792 aa24.62■■□□□ 1.53
TRAF4-207ENST00000461195 TADA2AO75478 443 aa24.61■■□□□ 1.53
TRAF4-207ENST00000461195 URODP06132 367 aa24.61■■□□□ 1.53
TRAF4-207ENST00000461195 MATR3P43243 847 aaKnown RBP eCLIP24.61■■□□□ 1.53
TRAF4-207ENST00000461195 LIG4P49917 911 aa24.61■■□□□ 1.53
TRAF4-207ENST00000461195 DNM1Q05193 864 aaKnown RBP24.61■■□□□ 1.53
TRAF4-207ENST00000461195 MCL1Q07820 350 aa24.61■■□□□ 1.53
TRAF4-207ENST00000461195 SMAD2Q15796 467 aaKnown RBP24.61■■□□□ 1.53
TRAF4-207ENST00000461195 TAS1R1Q7RTX1 841 aa24.61■■□□□ 1.53
TRAF4-207ENST00000461195 PPP1R10Q96QC0 940 aaKnown RBP24.61■■□□□ 1.53
TRAF4-207ENST00000461195 FIZ1Q96SL8 496 aa24.61■■□□□ 1.53
TRAF4-207ENST00000461195 PAAF1Q9BRP4 392 aa24.61■■□□□ 1.53
TRAF4-207ENST00000461195 EMILIN2Q9BXX0 1053 aa24.61■■□□□ 1.53
TRAF4-207ENST00000461195 NMT1P30419 496 aaKnown RBP24.6■■□□□ 1.53
TRAF4-207ENST00000461195 GTF2BQ00403 316 aa24.6■■□□□ 1.53
TRAF4-207ENST00000461195 XKR4Q5GH76 650 aa24.6■■□□□ 1.53
TRAF4-207ENST00000461195 GLRA4Q5JXX5 417 aa24.6■■□□□ 1.53
TRAF4-207ENST00000461195 ANKRD54Q6NXT1 300 aa24.6■■□□□ 1.53
TRAF4-207ENST00000461195 FUT10Q6P4F1 479 aa24.6■■□□□ 1.53
TRAF4-207ENST00000461195 ALKAL1Q6UXT8 129 aa24.6■■□□□ 1.53
TRAF4-207ENST00000461195 DNAJC19Q96DA6 116 aa24.6■■□□□ 1.53
TRAF4-207ENST00000461195 SEL1LQ9UBV2 794 aa24.6■■□□□ 1.53
TRAF4-207ENST00000461195 PRKAG3Q9UGI9 489 aa24.6■■□□□ 1.53
TRAF4-207ENST00000461195 SMIM28A0A1B0GU29 152 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 HNRNPDLO14979 420 aaKnown RBP24.59■■□□□ 1.53
TRAF4-207ENST00000461195 LILRB3O75022 631 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 PIGRP01833 764 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 GAP43P17677 238 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 ME1P48163 572 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 GLUD2P49448 558 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 BECN1Q14457 450 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 AXDND1Q5T1B0 1012 aaPredicted RBP24.59■■□□□ 1.53
TRAF4-207ENST00000461195 KIAA1841Q6NSI8 718 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 SHC4Q6S5L8 630 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 PPFIBP1Q86W92 1011 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 SFR1Q86XK3 245 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 SNX27Q96L92 541 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 LRFN3Q9BTN0 628 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 GPR62Q9BZJ7 368 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 ST6GALNAC4Q9H4F1 302 aa24.59■■□□□ 1.53
TRAF4-207ENST00000461195 SF3B1O75533 1304 aaKnown RBP eCLIP24.59■■□□□ 1.533e-6■■■■□ 20.7
TRAF4-207ENST00000461195 C2CD2LO14523 706 aa24.58■■□□□ 1.53
TRAF4-207ENST00000461195 CNPP09543 421 aaKnown RBP24.58■■□□□ 1.53
TRAF4-207ENST00000461195 HOXB8P17481 243 aaPredicted RBP24.58■■□□□ 1.53
TRAF4-207ENST00000461195 DSG1Q02413 1049 aa24.58■■□□□ 1.53
TRAF4-207ENST00000461195 USP41Q3LFD5 358 aa24.58■■□□□ 1.53
TRAF4-207ENST00000461195 KIAA0319Q5VV43 1072 aa24.58■■□□□ 1.53
TRAF4-207ENST00000461195 UROC1Q96N76 676 aa24.58■■□□□ 1.53
TRAF4-207ENST00000461195 KLHL5Q96PQ7 755 aa24.58■■□□□ 1.53
TRAF4-207ENST00000461195 CUEDC2Q9H467 287 aa24.58■■□□□ 1.53
TRAF4-207ENST00000461195 CHST7Q9NS84 486 aa24.58■■□□□ 1.53
TRAF4-207ENST00000461195 PCDHA7Q9UN72 937 aa24.58■■□□□ 1.53
TRAF4-207ENST00000461195 KIF4AO95239 1232 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 KCNE1P15382 129 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 KLRC2P26717 231 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 E2F4Q16254 413 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 TPRNQ4KMQ1 711 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 SEZ6Q53EL9 994 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 ZC2HC1CQ53FD0 456 aaPredicted RBP24.57■■□□□ 1.52
TRAF4-207ENST00000461195 SYCE2Q6PIF2 218 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 ZNF720Q7Z2F6 126 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 MAP4K3Q8IVH8 894 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 HASPINQ8TF76 798 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 SLC22A17Q8WUG5 538 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 KHSRPQ92945 711 aaKnown RBP eCLIP24.57■■□□□ 1.52
TRAF4-207ENST00000461195 LRRC27Q9C0I9 530 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 HAPLN2Q9GZV7 340 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 TNMDQ9H2S6 317 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 SLC38A7Q9NVC3 462 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 CNTN3Q9P232 1028 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 RCOR1Q9UKL0 485 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 ZDHHC9Q9Y397 364 aa24.57■■□□□ 1.52
TRAF4-207ENST00000461195 USP15Q9Y4E8 981 aaPredicted RBP24.57■■□□□ 1.52
TRAF4-207ENST00000461195 PDCD11Q14690 1871 aaKnown RBP24.56■■□□□ 1.52
TRAF4-207ENST00000461195 IDEP14735 1019 aa24.56■■□□□ 1.52
TRAF4-207ENST00000461195 KYAT1Q16773 422 aa24.56■■□□□ 1.52
TRAF4-207ENST00000461195 ADHFE1Q8IWW8 467 aa24.56■■□□□ 1.52
TRAF4-207ENST00000461195 GPR65Q8IYL9 337 aa24.56■■□□□ 1.52
TRAF4-207ENST00000461195 IQUBQ8NA54 791 aa24.56■■□□□ 1.52
TRAF4-207ENST00000461195 DHX58Q96C10 678 aa24.56■■□□□ 1.52
TRAF4-207ENST00000461195 HVCN1Q96D96 273 aa24.56■■□□□ 1.52
TRAF4-207ENST00000461195 ZMAT2Q96NC0 199 aaKnown RBP24.56■■□□□ 1.52
TRAF4-207ENST00000461195 S1PR5Q9H228 398 aa24.56■■□□□ 1.52
TRAF4-207ENST00000461195 MRPL44Q9H9J2 332 aaKnown RBP24.56■■□□□ 1.52
TRAF4-207ENST00000461195 DZANK1Q9NVP4 752 aa24.56■■□□□ 1.52
TRAF4-207ENST00000461195 TMEM189-UBE2V1I3L0A0 370 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 CLTAP09496 248 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 EPCAMP16422 314 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 ZP2Q05996 745 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 SLC10A6Q3KNW5 377 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 HERC4Q5GLZ8 1057 aaPredicted RBP24.55■■□□□ 1.52
TRAF4-207ENST00000461195 TMEM31Q5JXX7 168 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 DCLRE1AQ6PJP8 1040 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 GJD3Q8N144 294 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 B3GALT6Q96L58 329 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 RXFP1Q9HBX9 757 aa24.55■■□□□ 1.52
TRAF4-207ENST00000461195 KBTBD4Q9NVX7 518 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms