RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 ARMC6Q6NXE6 501 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 DRICH1Q6PGQ1 229 aaPredicted RBP4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 SPATS2Q86XZ4 545 aaKnown RBP4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 CCDC146Q8IYE0 955 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 EXOC8Q8IYI6 725 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 MSL3Q8N5Y2 521 aaKnown RBP4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 CAGE1Q8TC20 777 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 RSAD2Q8WXG1 361 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 SLC9A6Q92581 669 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 ACAP3Q96P50 834 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 SPATA5L1Q9BVQ7 753 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 SYNPO2LQ9H987 977 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 TESQ9UGI8 421 aaKnown RBP4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 USP15Q9Y4E8 981 aaPredicted RBP4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 COX11Q9Y6N1 276 aa4.72□□□□□ -1.65
SPTLC1-203ENST00000461132 LOC102724159A0A0B4J2E5 919 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 GPR39O43194 453 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 PRC1O43663 620 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 EYA4O95677 639 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 C1RP00736 705 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 LPLP06858 475 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 ITGAMP11215 1152 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 ZFP36P26651 326 aaKnown RBP4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 SCAND1P57086 179 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 MEF2AQ02078 507 aaPredicted RBP4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 PDCD1Q15116 288 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 PWP2Q15269 919 aaKnown RBP4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 UBE3CQ15386 1083 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 FBXO42Q6P3S6 717 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 FMNL3Q8IVF7 1028 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 OR14C36Q8NHC7 312 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 AHCYL2Q96HN2 611 aaKnown RBP4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 PHACTR3Q96KR7 559 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 REXO4Q9GZR2 422 aaKnown RBP4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 PRSS50Q9UI38 385 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 ATP11BQ9Y2G3 1177 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 CHST2Q9Y4C5 530 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 FPGT-TNNI3KV9GXZ4 949 aa4.71□□□□□ -1.66
SPTLC1-203ENST00000461132 A0A1W2PR48 441 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 PIPSLA2A3N6 862 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 TBKBP1A7MCY6 615 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 ALG1L2C9J202 215 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 PLIN1O60240 522 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 ITGA10O75578 1167 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 EIF3JO75822 258 aaKnown RBP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 FOSP01100 380 aaPredicted RBP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 ZSCAN20P17040 1043 aaPredicted RBP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 SEC24CP53992 1094 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 LGALS4P56470 323 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 EXOSC10Q01780 885 aaKnown RBP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 MPP3Q13368 585 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 FSCN1Q16658 493 aaKnown RBP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 PDCD4Q53EL6 469 aaKnown RBP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 PITRM1Q5JRX3 1037 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 LHFPL2Q6ZUX7 228 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 TGFBRAP1Q8WUH2 860 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 EAF2Q96CJ1 260 aaPredicted RBP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 RAX2Q96IS3 184 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 PAWRQ96IZ0 340 aaKnown RBP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 FDXACB1Q9BRP7 624 aaPredicted RBP4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 KCTD10Q9H3F6 313 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 EDARQ9UNE0 448 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 NOX1Q9Y5S8 564 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 WASHC2AQ641Q2 1341 aa4.7□□□□□ -1.66
SPTLC1-203ENST00000461132 PEX14O75381 377 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 GASTP01350 101 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 ENPP1P22413 925 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 PTTG1IPP53801 180 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 RESTQ13127 1097 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 TP53BP2Q13625 1128 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 TRIM25Q14258 630 aaKnown RBP4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 PRR16Q569H4 304 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 GPRIN1Q7Z2K8 1008 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 DDX42Q86XP3 938 aaKnown RBP eCLIP4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 SLC44A3Q8N4M1 653 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 BOLLQ8N9W6 283 aaKnown RBP4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 RNF169Q8NCN4 708 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 MDM1Q8TC05 714 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 COG1Q8WTW3 980 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 STAG1Q8WVM7 1258 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 LINC00476Q8WZB0 136 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 FAM126AQ9BYI3 521 aaPredicted RBP4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 QRSL1Q9H0R6 528 aaKnown RBP4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 KIAA1586Q9HCI6 787 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 VTA1Q9NP79 307 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 C14orf119Q9NWQ9 140 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 SYBUQ9NX95 663 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 SLC5A4Q9NY91 659 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 TLK1Q9UKI8 766 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 ZBTB21Q9ULJ3 1066 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 ATP8A1Q9Y2Q0 1164 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 MAP3K2Q9Y2U5 619 aa4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 EPN1Q9Y6I3 576 aaPredicted RBP4.69□□□□□ -1.66
SPTLC1-203ENST00000461132 ZMYM3Q14202 1370 aa4.68□□□□□ -1.66
SPTLC1-203ENST00000461132 HMGB1P1B2RPK0 211 aaPredicted RBP4.68□□□□□ -1.66
SPTLC1-203ENST00000461132 ZNF185O15231 689 aa4.68□□□□□ -1.66
SPTLC1-203ENST00000461132 CDKL5O76039 1030 aa4.68□□□□□ -1.66
SPTLC1-203ENST00000461132 PRKD3O94806 890 aa4.68□□□□□ -1.66
SPTLC1-203ENST00000461132 ESRRBO95718 433 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms