RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 REEP2Q9BRK0 252 aa18.14■□□□□ 0.49
APTX-210ENST00000460945 KCND2Q9NZV8 630 aa18.14■□□□□ 0.49
APTX-210ENST00000460945 FBXO2Q9UK22 296 aaPredicted RBP18.14■□□□□ 0.49
APTX-210ENST00000460945 SSX2IPQ9Y2D8 614 aa18.14■□□□□ 0.49
APTX-210ENST00000460945 HARSP12081 509 aaKnown RBP18.13■□□□□ 0.49
APTX-210ENST00000460945 RPL17P18621 184 aaKnown RBP18.13■□□□□ 0.49
APTX-210ENST00000460945 USP41Q3LFD5 358 aa18.13■□□□□ 0.49
APTX-210ENST00000460945 RTP2Q5QGT7 225 aa18.13■□□□□ 0.49
APTX-210ENST00000460945 PRSS55Q6UWB4 352 aaPredicted RBP18.13■□□□□ 0.49
APTX-210ENST00000460945 MPZL3Q6UWV2 235 aa18.13■□□□□ 0.49
APTX-210ENST00000460945 APBB1IPQ7Z5R6 666 aaPredicted RBP18.13■□□□□ 0.49
APTX-210ENST00000460945 GLYCTKQ8IVS8 523 aa18.13■□□□□ 0.49
APTX-210ENST00000460945 CLIC6Q96NY7 704 aa18.13■□□□□ 0.49
APTX-210ENST00000460945 PPP1R10Q96QC0 940 aaKnown RBP18.13■□□□□ 0.49
APTX-210ENST00000460945 TCHPQ9BT92 498 aa18.13■□□□□ 0.49
APTX-210ENST00000460945 TSHZ2Q9NRE2 1034 aa18.13■□□□□ 0.49
APTX-210ENST00000460945 SMIM28A0A1B0GU29 152 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 STX6O43752 255 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 ADH1AP07327 375 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 SPATA31D3P0C874 917 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 MCF2P10911 925 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 MTHFRP42898 656 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 SMTNP53814 917 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 NCKAP1LP55160 1127 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 STRN3Q13033 797 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 SEZ6Q53EL9 994 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 SPATA31D4Q6ZUB0 917 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 PALB2Q86YC2 1186 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 SNX21Q969T3 373 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 USP28Q96RU2 1077 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 CCDC94Q9BW85 323 aaPredicted RBP18.12■□□□□ 0.49
APTX-210ENST00000460945 CCSER1Q9C0I3 900 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 GOLGA2P5Q9HBQ8 144 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 MAN1C1Q9NR34 630 aa18.12■□□□□ 0.49
APTX-210ENST00000460945 SPDYE4A6NLX3 237 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 MEFVO15553 781 aaPredicted RBP18.11■□□□□ 0.49
APTX-210ENST00000460945 BRD1O95696 1058 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 CLCNKBP51801 687 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 SOX4Q06945 474 aaPredicted RBP18.11■□□□□ 0.49
APTX-210ENST00000460945 ATAT1Q5SQI0 421 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 FAM171A1Q5VUB5 890 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 CD300LGQ6UXG3 332 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 ALKAL1Q6UXT8 129 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 MYCT1Q8N699 235 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 RIPOR3Q96MK2 946 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 ZMAT2Q96NC0 199 aaKnown RBP18.11■□□□□ 0.49
APTX-210ENST00000460945 NECTIN4Q96NY8 510 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 ACAP3Q96P50 834 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 HAPLN2Q9GZV7 340 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 SFXN1Q9H9B4 322 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 LARSQ9P2J5 1176 aaKnown RBP18.11■□□□□ 0.49
APTX-210ENST00000460945 ANKFY1Q9P2R3 1169 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 ODF2LQ9ULJ1 636 aa18.11■□□□□ 0.49
APTX-210ENST00000460945 SRPRBQ9Y5M8 271 aaKnown RBP18.11■□□□□ 0.49
APTX-210ENST00000460945 SF3B1O75533 1304 aaKnown RBP eCLIP18.11■□□□□ 0.495e-11■■■■■ 34.5
APTX-210ENST00000460945 C2CD4DB7Z1M9 353 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 TOM1L1O75674 476 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 FAM13AO94988 1023 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 GLUD1P00367 558 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 KRT18P05783 430 aaKnown RBP18.1■□□□□ 0.49
APTX-210ENST00000460945 YARSP54577 528 aaKnown RBP18.1■□□□□ 0.49
APTX-210ENST00000460945 XKR4Q5GH76 650 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 HAUS6Q7Z4H7 955 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 GPR149Q86SP6 731 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 CEP57Q86XR8 500 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 C3orf58Q8NDZ4 430 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 LARP4BQ92615 738 aaKnown RBP18.1■□□□□ 0.49
APTX-210ENST00000460945 SNX27Q96L92 541 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 ZHX3Q9H4I2 956 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 FNIP2Q9P278 1114 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 KCNG1Q9UIX4 513 aa18.1■□□□□ 0.49
APTX-210ENST00000460945 ANK1P16157 1881 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 PRR33A8MZF0 331 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 I3L4J1 428 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 RFPL2O75678 378 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 DDIT3P35638 169 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 ZNF131P52739 623 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 NOLC1Q14978 699 aaKnown RBP eCLIP18.09■□□□□ 0.49
APTX-210ENST00000460945 UPP1Q16831 310 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 ZPBP2Q6X784 338 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 EDAQ92838 391 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 TTPALQ9BTX7 342 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 PARVGQ9HBI0 331 aa18.09■□□□□ 0.49
APTX-210ENST00000460945 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.09■□□□□ 0.49
APTX-210ENST00000460945 TOPORSQ9NS56 1045 aaPredicted RBP18.09■□□□□ 0.49
APTX-210ENST00000460945 DAXXQ9UER7 740 aaPredicted RBP18.09■□□□□ 0.49
APTX-210ENST00000460945 DOCK8Q8NF50 2099 aa18.08■□□□□ 0.49
APTX-210ENST00000460945 CCDC195A0A1B0GUA6 201 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 K7ENM7 598 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 TGM5O43548 720 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 B3GAT3O94766 335 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 KCNE1P15382 129 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 NMT1P30419 496 aaKnown RBP18.08■□□□□ 0.48
APTX-210ENST00000460945 MATR3P43243 847 aaKnown RBP eCLIP18.08■□□□□ 0.488e-7■■■■□ 24.4
APTX-210ENST00000460945 BRCC3P46736 316 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 ZXDAP98168 799 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 SLC39A14Q15043 492 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 PSMD5Q16401 504 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 SLC10A6Q3KNW5 377 aa18.08■□□□□ 0.48
APTX-210ENST00000460945 FOXD4L5Q5VV16 416 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms