RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 ZNF677Q86XU0 584 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 SCYL3Q8IZE3 742 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 CDKL2Q92772 493 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 IDI2Q9BXS1 227 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 ECT2Q9H8V3 914 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 HOXC10Q9NYD6 342 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 RBAK-RBAKDNI3L0D1 243 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 ADAMTS3O15072 1205 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 CPP00450 1065 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 ICAM1P05362 532 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 KRT7P08729 469 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 SESN3P58005 492 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 PLCB4Q15147 1175 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 ECM1Q16610 540 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 CD302Q8IX05 232 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 SLC20A1Q8WUM9 679 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 FOXP3Q9BZS1 431 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 SENP1Q9P0U3 644 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 FRMPD4Q14CM0 1322 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 MEIS2O14770 477 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 NR3C2P08235 984 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 RARGP13631 454 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 CIITAP33076 1130 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 ARSEP51690 589 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 ZNF844Q08AG5 666 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 PDIA2Q13087 525 aaKnown RBP12.81□□□□□ -0.36
CPNE6-202ENST00000460657 KYNUQ16719 465 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 TMC3Q7Z5M5 1100 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 ZBED8Q8IZ13 594 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 INPP4AQ96PE3 977 aaPredicted RBP12.81□□□□□ -0.36
CPNE6-202ENST00000460657 LRRC37BQ96QE4 947 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 RBM15Q96T37 977 aaKnown RBP eCLIP12.81□□□□□ -0.36
CPNE6-202ENST00000460657 MOV10L1Q9BXT6 1211 aaKnown RBP12.81□□□□□ -0.36
CPNE6-202ENST00000460657 OSBPL8Q9BZF1 889 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 ACAD9Q9H845 621 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 TMEM120BA0PK00 339 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 CAND2O75155 1236 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 CYP3A4P08684 503 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 TAP1Q03518 808 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 PPP2R5CQ13362 524 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 TKFCQ3LXA3 575 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 CBWD2Q8IUF1 395 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 RCOR2Q8IZ40 523 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 FBXO41Q8TF61 875 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 NLRP4Q96MN2 994 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 FAM53CQ9NYF3 392 aa12.81□□□□□ -0.36
CPNE6-202ENST00000460657 FRMD3A2A2Y4 597 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 GOLGA8MH3BSY2 632 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 POLRMTO00411 1230 aaKnown RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 TAL1P17542 331 aaPredicted RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ACOT2P49753 483 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 CENPCQ03188 943 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 TFDP2Q14188 446 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 TRPM8Q7Z2W7 1104 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 SDCCAG8Q86SQ7 713 aaPredicted RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ATP8B4Q8TF62 1192 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 SLC5A5Q92911 643 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 C17orf75Q9HAS0 396 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 HLA-DRAP01903 254 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 TM4SF1P30408 202 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ITGA8P53708 1063 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 HP1BP3Q5SSJ5 553 aaPredicted RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 HGSNATQ68CP4 663 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ZNF772Q68DY9 489 aaPredicted RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 BTNL9Q6UXG8 535 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 SLC30A10Q6XR72 485 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ZNF354CQ86Y25 554 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ZFPM1Q8IX07 1006 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 RDM1Q8NG50 284 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 CFAP61Q8NHU2 1237 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 HSPH1Q92598 858 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 WRNIP1Q96S55 665 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 TRIM55Q9BYV6 548 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 SLC40A1Q9NP59 571 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 IGSF9BQ9UPX0 1349 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 CYP11B1P15538 503 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 MARK3P27448 753 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 KCNA1Q09470 495 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ATP11CQ8NB49 1132 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 PSPC1Q8WXF1 523 aaKnown RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 RNF34Q969K3 372 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 HEXIM2Q96MH2 286 aaKnown RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 SERPINB12Q96P63 405 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 SENP7Q9BQF6 1050 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 MRPL4Q9BYD3 311 aaKnown RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ETNK1Q9HBU6 452 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 FBXO40Q9UH90 709 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ARHGAP42A6NI28 874 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 PI4K2BG5E9Z4 385 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 MAFGO15525 162 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 ZBED1O96006 694 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
CPNE6-202ENST00000460657 MTMR2Q13614 643 aa12.8□□□□□ -0.36
CPNE6-202ENST00000460657 P3H1Q32P28 736 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms