RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 GJB1P08034 283 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PFKMP08237 780 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PAPOLAP51003 745 aaKnown RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CYP27A1Q02318 531 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NFIAQ12857 509 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SPP2Q13103 211 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LRRC24Q50LG9 513 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NAA35Q5VZE5 725 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NEK8Q86SG6 692 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PARP9Q8IXQ6 854 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RGL4Q8IZJ4 473 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ARHGAP24Q8N264 748 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NME8Q8N427 588 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PPP4R1Q8TF05 950 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SAAL1Q96ER3 474 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZDHHC15Q96MV8 337 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TRAIPQ9BWF2 469 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 YIPF2Q9BWQ6 316 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EHD4Q9H223 541 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HDAC6Q9UBN7 1215 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 BCORQ6W2J9 1755 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ARFGEF2Q9Y6D5 1785 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TTI1O43156 1089 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AP5Z1O43299 807 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NPTXRO95502 500 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 POLR2FP61218 127 aaKnown RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PTK2Q05397 1052 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MXD4Q14582 209 aaPredicted RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CNOT6LQ96LI5 555 aaKnown RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FAM210AQ96ND0 272 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MTRQ99707 1265 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IRX2Q9BZI1 471 aaPredicted RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 YIPF3Q9GZM5 350 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RPAP3Q9H6T3 665 aaPredicted RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GJB4Q9NTQ9 266 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SALL3Q9BXA9 1300 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 COL5A3P25940 1745 aaPredicted RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MYO1DO94832 1006 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 BAG2O95816 211 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FGBP02675 491 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KLRC2P26717 231 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MTF1Q14872 753 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TDRD10Q5VZ19 366 aaKnown RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 OTUB1Q96FW1 271 aaPredicted RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DBNLQ9UJU6 430 aaKnown RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PLAAQ9Y263 795 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ATP8A1Q9Y2Q0 1164 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DDX60Q8IY21 1712 aaKnown RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TOGARAM1Q9Y4F4 1720 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CCDC189A1A4V9 331 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FTCDO95954 541 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SV2CQ496J9 727 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SBK1Q52WX2 424 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ATAT1Q5SQI0 421 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF654Q8IZM8 581 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ARMC2Q8NEN0 867 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SGSM3Q96HU1 749 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FAM84BQ96KN1 310 aaPredicted RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AIFM3Q96NN9 605 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NT5C1BQ96P26 610 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DISC1Q9NRI5 854 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PSD3Q9NYI0 1048 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ADGRG1Q9Y653 693 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PFDN1O60925 122 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RHOBTB3O94955 611 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ABCB4P21439 1286 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZMYM1Q5SVZ6 1142 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TMEM164Q5U3C3 297 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DUS1LQ6P1R4 473 aaKnown RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EMBQ6PCB8 327 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CD302Q8IX05 232 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CCDC24Q8N4L8 307 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MCOLN3Q8TDD5 553 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 IFT43Q96FT9 208 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MRPL4Q9BYD3 311 aaKnown RBP6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RAD18Q9NS91 495 aa6.63□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PSMD3O43242 534 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC2A3P11169 496 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RFC2P35250 354 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CORO7P57737 925 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EXOSC10Q01780 885 aaKnown RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PPATQ06203 517 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KRT31Q15323 416 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RPS6KA2Q15349 733 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 MAP3K21Q5TCX8 1036 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ANKRD20A3Q5VUR7 823 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RESP18Q5W5W9 173 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PHLDB3Q6NSJ2 640 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NLRP14Q86W24 1093 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RNF168Q8IYW5 571 aaPredicted RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PROM2Q8N271 834 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PNMA1Q8ND90 353 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FAM163AQ96GL9 167 aaPredicted RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LRRC37BQ96QE4 947 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RMDN3Q96TC7 470 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TSC22D3Q99576 134 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC39A2Q9NP94 309 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NOP53Q9NZM5 478 aaKnown RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF70Q9UC06 446 aaPredicted RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PCDHA12Q9UN75 941 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms