RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 DENND2DQ9H6A0 471 aaPredicted RBP16.54■□□□□ 0.24
SSR4-206ENST00000460616 IRAK4Q9NWZ3 460 aa16.54■□□□□ 0.24
SSR4-206ENST00000460616 THAP12O43422 761 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 TCEA3O75764 348 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 DCTN3O75935 186 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 LMNAP02545 664 aaKnown RBP16.53■□□□□ 0.24
SSR4-206ENST00000460616 T-ENOLP0DO92 83 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 ITIH2P19823 946 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 STAT3P40763 770 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 PSMC6P62333 389 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 PABPC4Q13310 644 aaKnown RBP eCLIP16.53■□□□□ 0.248e-9■■■■■ 32
SSR4-206ENST00000460616 LAMB3Q13751 1172 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 ARHGAP44Q17R89 818 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 IRGCQ6NXR0 463 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 WDR66Q8TBY9 1149 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 FAM136AQ96C01 138 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 BORCS6Q96GS4 357 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 TRIM4Q9C037 500 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 WNT8AQ9H1J5 351 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 DNAJC17Q9NVM6 304 aaKnown RBP16.53■□□□□ 0.24
SSR4-206ENST00000460616 RGL1Q9NZL6 768 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 USP20Q9Y2K6 914 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 DICER1Q9UPY3 1922 aaKnown RBP16.53■□□□□ 0.24
SSR4-206ENST00000460616 NVLO15381 856 aaKnown RBP16.53■□□□□ 0.24
SSR4-206ENST00000460616 RAD17O75943 681 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 GCNT3O95395 438 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 POLE2P56282 527 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 KCNA1Q09470 495 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 OR52E8Q6IFG1 317 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 FAM186BQ8IYM0 893 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 ANKRD35Q8N283 1001 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 DRAXINQ8NBI3 349 aaPredicted RBP16.53■□□□□ 0.24
SSR4-206ENST00000460616 AGPAT1Q99943 283 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.53■□□□□ 0.24
SSR4-206ENST00000460616 SCOCQ9UIL1 159 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 PHTF1Q9UMS5 762 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 DNM3Q9UQ16 869 aa16.53■□□□□ 0.24
SSR4-206ENST00000460616 ADGRA3Q8IWK6 1321 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 MEIS1O00470 390 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
SSR4-206ENST00000460616 PSMC2P35998 433 aaKnown RBP16.52■□□□□ 0.24
SSR4-206ENST00000460616 FMO5P49326 533 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 CLK2P49760 499 aaKnown RBP16.52■□□□□ 0.24
SSR4-206ENST00000460616 GPC5P78333 572 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 DNAJC3Q13217 504 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 SIX1Q15475 284 aaPredicted RBP16.52■□□□□ 0.24
SSR4-206ENST00000460616 RNF207Q6ZRF8 634 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 UCMAQ8WVF2 138 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 KIFAP3Q92845 792 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 ZNF333Q96JL9 665 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 DNAJC18Q9H819 358 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 STOML1Q9UBI4 398 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 ASIC3Q9UHC3 531 aa16.52■□□□□ 0.24
SSR4-206ENST00000460616 SLC26A4O43511 780 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 CDH16O75309 829 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 CETPP11597 493 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 WDR4P57081 412 aaKnown RBP16.52■□□□□ 0.23
SSR4-206ENST00000460616 KRT17Q04695 432 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 BMT2Q1RMZ1 405 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 RHBDF2Q6PJF5 856 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 CATSPER3Q86XQ3 398 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 LRRC8CQ8TDW0 803 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 LRRC19Q9H756 370 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 CHORDC1Q9UHD1 332 aaPredicted RBP16.52■□□□□ 0.23
SSR4-206ENST00000460616 LGALS13Q9UHV8 139 aa16.52■□□□□ 0.23
SSR4-206ENST00000460616 RPL26L1Q9UNX3 145 aaKnown RBP16.52■□□□□ 0.23
SSR4-206ENST00000460616 FAM47DPA6NHR8 397 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 FOXN3O00409 490 aaPredicted RBP16.51■□□□□ 0.23
SSR4-206ENST00000460616 MAGEB2O15479 319 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 RNF8O76064 485 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 DACT2Q5SW24 774 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 C16orf86Q6ZW13 317 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 SYT2Q8N9I0 419 aaPredicted RBP16.51■□□□□ 0.23
SSR4-206ENST00000460616 C12orf50Q8NA57 414 aaPredicted RBP16.51■□□□□ 0.23
SSR4-206ENST00000460616 GPCPD1Q9NPB8 672 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 NMRK1Q9NWW6 199 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 APEX2Q9UBZ4 518 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 ACTL7BQ9Y614 415 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 FRMPD4Q14CM0 1322 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 LTBP3Q9NS15 1303 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 RASA4BC9J798 803 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 RASA4O43374 803 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 CBX6O95503 412 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 MARK3P27448 753 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 VHLP40337 213 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 SESN3P58005 492 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 MOGSQ13724 837 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 KIF22Q14807 665 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 CCDC6Q16204 474 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 NIM1KQ8IY84 436 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 MORC4Q8TE76 937 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 ITFG2Q969R8 447 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 GORASP1Q9BQQ3 440 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 CCDC77Q9BR77 488 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 LRCH1Q9Y2L9 728 aa16.51■□□□□ 0.23
SSR4-206ENST00000460616 PNMA6FA0A0J9YX94 578 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 A0A1W2PRG0 241 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 RSPH10B2B2RC85 870 aa16.5■□□□□ 0.23
SSR4-206ENST00000460616 TRAFD1O14545 582 aaPredicted RBP16.5■□□□□ 0.23
SSR4-206ENST00000460616 TGFB1I1O43294 461 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms