RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 ARIH1Q9Y4X5 557 aaPredicted RBP22.92■■□□□ 1.26
SRM-202ENST00000459997 MYH11P35749 1972 aa22.92■■□□□ 1.26
SRM-202ENST00000459997 C2orf16Q68DN1 1984 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 NPHP3-ACAD11A0A0J9YXS1 232 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 SPATA31D3P0C874 917 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 RPL17P18621 184 aaKnown RBP22.91■■□□□ 1.26
SRM-202ENST00000459997 PLA2G5P39877 138 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 SMTNP53814 917 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 CACNB1Q02641 598 aaPredicted RBP22.91■■□□□ 1.26
SRM-202ENST00000459997 GRIN1Q05586 938 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 FAM171A1Q5VUB5 890 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 PRSS55Q6UWB4 352 aaPredicted RBP22.91■■□□□ 1.26
SRM-202ENST00000459997 C15orf39Q6ZRI6 1047 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 SPATA31D4Q6ZUB0 917 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 CEP57Q86XR8 500 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 TMEM161BQ8NDZ6 487 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 FAM122AQ96E09 287 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 MFSD14AQ96MC6 490 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 TTPALQ9BTX7 342 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 USTQ9Y2C2 406 aa22.91■■□□□ 1.26
SRM-202ENST00000459997 MCF2P10911 925 aa22.9■■□□□ 1.26
SRM-202ENST00000459997 LONP1P36776 959 aaKnown RBP22.9■■□□□ 1.26
SRM-202ENST00000459997 SIGLEC14Q08ET2 396 aa22.9■■□□□ 1.26
SRM-202ENST00000459997 DHX8Q14562 1220 aaKnown RBP22.9■■□□□ 1.26
SRM-202ENST00000459997 ARSHQ5FYA8 562 aa22.9■■□□□ 1.26
SRM-202ENST00000459997 MPZL3Q6UWV2 235 aa22.9■■□□□ 1.26
SRM-202ENST00000459997 CCDC149Q6ZUS6 474 aa22.9■■□□□ 1.26
SRM-202ENST00000459997 CMASQ8NFW8 434 aaPredicted RBP22.9■■□□□ 1.26
SRM-202ENST00000459997 RASSF8Q8NHQ8 419 aa22.9■■□□□ 1.26
SRM-202ENST00000459997 TECTAO75443 2155 aa22.9■■□□□ 1.26
SRM-202ENST00000459997 SMIM28A0A1B0GU29 152 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 CCDC195A0A1B0GUA6 201 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 TGM5O43548 720 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 MAPTP10636 758 aaKnown RBP22.89■■□□□ 1.25
SRM-202ENST00000459997 HARSP12081 509 aaKnown RBP22.89■■□□□ 1.25
SRM-202ENST00000459997 PROZP22891 400 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 CLCNKBP51801 687 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 ELAVL2Q12926 359 aaKnown RBP22.89■■□□□ 1.25
SRM-202ENST00000459997 GPBP1Q86WP2 473 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 ZDHHC14Q8IZN3 488 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 KREMEN2Q8NCW0 462 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 HDAC7Q8WUI4 952 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 PBXIP1Q96AQ6 731 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 UROC1Q96N76 676 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 LARSQ9P2J5 1176 aaKnown RBP22.89■■□□□ 1.25
SRM-202ENST00000459997 ANKFY1Q9P2R3 1169 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 TRIP11Q15643 1979 aa22.89■■□□□ 1.25
SRM-202ENST00000459997 ABLIM1O14639 778 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 RFPL2O75678 378 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 B3GAT3O94766 335 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 BRD1O95696 1058 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 C1RP00736 705 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 PLCG1P19174 1290 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 KARSQ15046 597 aaKnown RBP22.88■■□□□ 1.25
SRM-202ENST00000459997 PSMD5Q16401 504 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 BMP8AQ7Z5Y6 402 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 PLCD3Q8N3E9 789 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 LRRC15Q8TF66 581 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 PIK3R5Q8WYR1 880 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 ZBTB45Q96K62 511 aaPredicted RBP22.88■■□□□ 1.25
SRM-202ENST00000459997 ACAP3Q96P50 834 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 REEP2Q9BRK0 252 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 PLEKHA4Q9H4M7 779 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 GOLGA2P5Q9HBQ8 144 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 LIMD1Q9UGP4 676 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 ODF2LQ9ULJ1 636 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 SORCS3Q9UPU3 1222 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 CLIC4Q9Y696 253 aa22.88■■□□□ 1.25
SRM-202ENST00000459997 TMEM189-UBE2V1I3L0A0 370 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 TOM1L1O75674 476 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 SYT1P21579 422 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 IGFBP6P24592 240 aaPredicted RBP22.87■■□□□ 1.25
SRM-202ENST00000459997 MTMR3Q13615 1198 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 UPP1Q16831 310 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 XKR4Q5GH76 650 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 LILRA6Q6PI73 481 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 DCLRE1AQ6PJP8 1040 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 ALKAL1Q6UXT8 129 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 OTOP3Q7RTS5 596 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 LNX1Q8TBB1 728 aaPredicted RBP22.87■■□□□ 1.25
SRM-202ENST00000459997 ACSF2Q96CM8 615 aaPredicted RBP22.87■■□□□ 1.25
SRM-202ENST00000459997 SNX27Q96L92 541 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 BLOC1S4Q9NUP1 217 aa22.87■■□□□ 1.25
SRM-202ENST00000459997 H0YCG3 227 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 ASGR2P07307 311 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 NCKAP1LP55160 1127 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 SOX4Q06945 474 aaPredicted RBP22.86■■□□□ 1.25
SRM-202ENST00000459997 RESTQ13127 1097 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 MCM6Q14566 821 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 NOLC1Q14978 699 aaKnown RBP eCLIP22.86■■□□□ 1.25
SRM-202ENST00000459997 PDXDC1Q6P996 788 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 CYP26C1Q6V0L0 522 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 ZPBP2Q6X784 338 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.86■■□□□ 1.25
SRM-202ENST00000459997 SMG7Q92540 1137 aaKnown RBP22.86■■□□□ 1.25
SRM-202ENST00000459997 RAD54LQ92698 747 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 ASIC4Q96FT7 647 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 BICD1Q96G01 975 aa22.86■■□□□ 1.25
SRM-202ENST00000459997 INTS4Q96HW7 963 aaKnown RBP22.86■■□□□ 1.25
SRM-202ENST00000459997 CLSTN3Q9BQT9 956 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms