RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 COL11A1P12107 1806 aaPredicted RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 A0A1W2PRG0 241 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 SFI1A8K8P3 1242 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 K7ENM7 598 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 IPO5O00410 1097 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 RASGRF2O14827 1237 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 DKC1O60832 514 aaKnown RBP eCLIP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 CFBP00751 764 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 OAS1P00973 400 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 GH2P01242 217 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 MMEP08473 750 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 FDX1P10109 184 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 CHRNB2P17787 502 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 COMTP21964 271 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 HOXA13P31271 388 aaPredicted RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 SFNP31947 248 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 QARSP47897 775 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 IREB2P48200 963 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 MXI1P50539 228 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 SLC18A1P54219 525 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 INHBEP58166 350 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 BPIFB4P59827 614 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 CDR2Q01850 454 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 MAP3K10Q02779 954 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 CENPCQ03188 943 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 PPP3CAQ08209 521 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 CALCOCO2Q13137 446 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 PRPF4BQ13523 1007 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 AUHQ13825 339 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 PTK6Q13882 451 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 NEDD9Q14511 834 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 COG2Q14746 738 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 CNGA2Q16280 664 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 ARHGAP44Q17R89 818 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 C1orf220Q5T0J3 134 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 ANGEL2Q5VTE6 544 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 KRT39Q6A163 491 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 XRRA1Q6P2D8 792 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 PAXIP1Q6ZW49 1069 aaPredicted RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 MIGA2Q7L4E1 593 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 MIER3Q7Z3K6 550 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 MCF2L2Q86YR7 1114 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 RPUSD2Q8IZ73 545 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 CYP2W1Q8TAV3 490 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 ZNF564Q8TBZ8 553 aaPredicted RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 TRPM4Q8TD43 1214 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 PSPC1Q8WXF1 523 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 GLG1Q92896 1179 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 ZKSCAN4Q969J2 545 aaPredicted RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 VCPIP1Q96JH7 1222 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 PRMT6Q96LA8 375 aaPredicted RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 FBXL18Q96ME1 805 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 LXNQ9BS40 222 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 NTPCRQ9BSD7 190 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 TMEM117Q9H0C3 514 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 KIAA1586Q9HCI6 787 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 TMEM8AQ9HCN3 771 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 INTS9Q9NV88 658 aaKnown RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 HAUS2Q9NVX0 235 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 TAS2R14Q9NYV8 317 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 GGA3Q9NZ52 723 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 ZNF70Q9UC06 446 aaPredicted RBP6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 LGALS13Q9UHV8 139 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 SLC12A4Q9UP95 1085 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 SNX24Q9Y343 169 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 UBIAD1Q9Y5Z9 338 aa6.56□□□□□ -1.36
UBQLN4-202ENST00000459954 CEP350Q5VT06 3117 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 LOC285556D6RIA3 1793 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 RLFQ13129 1914 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 H0YCG3 227 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 DHX15O43143 795 aaKnown RBP6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 CA12O43570 354 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 RAD21O60216 631 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 SNX3O60493 162 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 SORBS3O60504 671 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 ECEL1O95672 775 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 TTC4O95801 387 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 GAS8O95995 478 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 SHBGP04278 402 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 ABHD2P08910 425 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 TRIM49P0CI25 452 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 TRIM49CP0CI26 452 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 ARP10275 920 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 RARAP10276 462 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 PYGMP11217 842 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 EZRP15311 586 aaKnown RBP6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 GARTP22102 1010 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 MAP2K2P36507 400 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 SKIV2L2P42285 1042 aaKnown RBP6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 RARRES1P49788 294 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 JAK3P52333 1124 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 RTP1P59025 263 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 IRX3P78415 501 aaPredicted RBP6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 FMO1Q01740 532 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 GCNT1Q02742 428 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 CCDC15Q0P6D6 951 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 TCP10Q12799 353 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 NR1H3Q13133 447 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 ACVR2BQ13705 512 aa6.55□□□□□ -1.36
UBQLN4-202ENST00000459954 ZNF268Q14587 947 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms