RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 SLFN12LQ6IEE8 588 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 GRAMD1CQ8IYS0 662 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 MICAL1Q8TDZ2 1067 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 PAGE5Q96GU1 130 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 MSTO1Q9BUK6 570 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 GOLPH3LQ9H4A5 285 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 TMEM206Q9H813 350 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 STK39Q9UEW8 545 aa23.75■■□□□ 1.39
SSNA1-202ENST00000459860 PVALEFA0A1B0GWK0 134 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 MYBP10242 640 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 CASP1P29466 404 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 DSC1Q08554 894 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 COL19A1Q14993 1142 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 PDE12Q6L8Q7 609 aaKnown RBP23.74■■□□□ 1.39
SSNA1-202ENST00000459860 COLGALT2Q8IYK4 626 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 GSTCDQ8NEC7 633 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 CCDC47Q96A33 483 aaKnown RBP23.74■■□□□ 1.39
SSNA1-202ENST00000459860 IGSF21Q96ID5 467 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 STRA6Q9BX79 667 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 ENTPD7Q9NQZ7 604 aa23.74■■□□□ 1.39
SSNA1-202ENST00000459860 PRG3Q9Y2Y8 225 aaPredicted RBP23.74■■□□□ 1.39
SSNA1-202ENST00000459860 PDCD11Q14690 1871 aaKnown RBP23.74■■□□□ 1.39
SSNA1-202ENST00000459860 PTGESO14684 152 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 NRP1O14786 923 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 OGTO15294 1046 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 B4GALT3O60512 393 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 ZNF202O95125 648 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 DNAJB1P25685 340 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 CASP5P51878 434 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 TUSC3Q13454 348 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 KANK3Q6NY19 840 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 KRBA2Q6ZNG9 492 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 SNX27Q96L92 541 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 COLEC11Q9BWP8 271 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 EXOC1Q9NV70 894 aa23.73■■□□□ 1.39
SSNA1-202ENST00000459860 PI4K2BG5E9Z4 385 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 EIF3DO15371 548 aaKnown RBP eCLIP23.72■■□□□ 1.39
SSNA1-202ENST00000459860 GPR37L1O60883 481 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 CLTAP09496 248 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 IL9P15248 144 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 POSTNQ15063 836 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 TMEM31Q5JXX7 168 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 TMC7Q7Z402 723 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 POMGNT1Q8WZA1 660 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 TCF25Q9BQ70 676 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 SLC38A7Q9NVC3 462 aa23.72■■□□□ 1.39
SSNA1-202ENST00000459860 UBE4BO95155 1302 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 A0A0B4J269 797 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 GRXCR2A6NFK2 248 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 PRPF6O94906 941 aaKnown RBP23.71■■□□□ 1.39
SSNA1-202ENST00000459860 CA8P35219 290 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 CAMK1Q14012 370 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 SEZ6Q53EL9 994 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 TCEAL5Q5H9L2 206 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 GLRA4Q5JXX5 417 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 SLC39A4Q6P5W5 647 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 HPS3Q969F9 1004 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 FGFBP2Q9BYJ0 223 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 HAPLN2Q9GZV7 340 aa23.71■■□□□ 1.39
SSNA1-202ENST00000459860 NGRNQ9NPE2 291 aaKnown RBP23.71■■□□□ 1.39
SSNA1-202ENST00000459860 ANKRD63C9JTQ0 380 aa23.7■■□□□ 1.38
SSNA1-202ENST00000459860 IRS1P35568 1242 aa23.7■■□□□ 1.38
SSNA1-202ENST00000459860 FAM160A1Q05DH4 1040 aa23.7■■□□□ 1.38
SSNA1-202ENST00000459860 PPP2R3AQ06190 1150 aa23.7■■□□□ 1.38
SSNA1-202ENST00000459860 PLPP4Q5VZY2 271 aa23.7■■□□□ 1.38
SSNA1-202ENST00000459860 PTCRAQ6ISU1 281 aaPredicted RBP23.7■■□□□ 1.38
SSNA1-202ENST00000459860 DDX53Q86TM3 631 aaKnown RBP23.7■■□□□ 1.38
SSNA1-202ENST00000459860 TMEM173Q86WV6 379 aaPredicted RBP23.7■■□□□ 1.38
SSNA1-202ENST00000459860 GJD3Q8N144 294 aa23.7■■□□□ 1.38
SSNA1-202ENST00000459860 FAM122AQ96E09 287 aa23.7■■□□□ 1.38
SSNA1-202ENST00000459860 RPF1Q9H9Y2 349 aaKnown RBP23.7■■□□□ 1.38
SSNA1-202ENST00000459860 PLEKHA5Q9HAU0 1116 aa23.7■■□□□ 1.38
SSNA1-202ENST00000459860 CNTN3Q9P232 1028 aa23.7■■□□□ 1.38
SSNA1-202ENST00000459860 AGO2Q9UKV8 859 aaKnown RBP23.7■■□□□ 1.38
SSNA1-202ENST00000459860 SMIM28A0A1B0GU29 152 aa23.69■■□□□ 1.38
SSNA1-202ENST00000459860 CASTOR2A6NHX0 329 aa23.69■■□□□ 1.38
SSNA1-202ENST00000459860 H3BQ06 376 aaPredicted RBP23.69■■□□□ 1.38
SSNA1-202ENST00000459860 CXCL8P10145 99 aa23.69■■□□□ 1.38
SSNA1-202ENST00000459860 ERVFC1P60507 584 aa23.69■■□□□ 1.38
SSNA1-202ENST00000459860 KCNA1Q09470 495 aa23.69■■□□□ 1.38
SSNA1-202ENST00000459860 HSP90AA2PQ14568 343 aaPredicted RBP23.69■■□□□ 1.38
SSNA1-202ENST00000459860 SMC1AQ14683 1233 aaKnown RBP23.69■■□□□ 1.38
SSNA1-202ENST00000459860 XKR4Q5GH76 650 aa23.69■■□□□ 1.38
SSNA1-202ENST00000459860 BCL7CQ8WUZ0 217 aaPredicted RBP23.69■■□□□ 1.38
SSNA1-202ENST00000459860 PABPC5Q96DU9 382 aaKnown RBP23.69■■□□□ 1.38
SSNA1-202ENST00000459860 UROC1Q96N76 676 aa23.69■■□□□ 1.38
SSNA1-202ENST00000459860 IPO9Q96P70 1041 aaKnown RBP23.69■■□□□ 1.38
SSNA1-202ENST00000459860 PPP1R10Q96QC0 940 aaKnown RBP23.69■■□□□ 1.38
SSNA1-202ENST00000459860 ARIH1Q9Y4X5 557 aaPredicted RBP23.69■■□□□ 1.38
SSNA1-202ENST00000459860 STYXL1Q9Y6J8 313 aa23.69■■□□□ 1.38
SSNA1-202ENST00000459860 BRWD1Q9NSI6 2320 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 FSD2A1L4K1 749 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 FAM86C2PA6NEL3 165 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 TISP43B9A030 160 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 NCK2O43639 380 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 KCNE1P15382 129 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 GARTP22102 1010 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 TNFSF9P41273 254 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 EHHADHQ08426 723 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 PSMD2Q13200 908 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms