RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PP2D1A8MPX8 630 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 LAD1O00515 517 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 LILRB3O75022 631 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 SF3B1O75533 1304 aaKnown RBP eCLIP17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 TOB1P50616 345 aaPredicted RBP17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 EFNA5P52803 228 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 DSG1Q02413 1049 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 TUSC3Q13454 348 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 PDIA5Q14554 519 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 HSP90AA2PQ14568 343 aaPredicted RBP17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 DCAF4L1Q3SXM0 396 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 APBB1IPQ7Z5R6 666 aaPredicted RBP17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 IGSF22Q8N9C0 903 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 GSTCDQ8NEC7 633 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 HASPINQ8TF76 798 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 CCDC113Q9H0I3 377 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 CACNG4Q9UBN1 327 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 DNM3Q9UQ16 869 aa17.34■□□□□ 0.37
CHCHD3-204ENST00000457942 COL4A3Q01955 1670 aa17.33■□□□□ 0.37
CHCHD3-204ENST00000457942 E9PMD0 336 aa17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 THP07101 528 aa17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 DMP1Q13316 513 aaPredicted RBP17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 ATF7IP2Q5U623 682 aa17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 KIAA0319Q5VV43 1072 aa17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 EEF1DP3Q658K8 133 aa17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 PALB2Q86YC2 1186 aa17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 RNF168Q8IYW5 571 aaPredicted RBP17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 TMX3Q96JJ7 454 aa17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 GPR62Q9BZJ7 368 aa17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.33■□□□□ 0.36
CHCHD3-204ENST00000457942 PHLPP2Q6ZVD8 1323 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 MYH11P35749 1972 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 K7ERI5 159 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 KRT37O76014 449 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 EDN1P05305 212 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 SPATA31D3P0C874 917 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 GJB2P29033 226 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 CDC25AP30304 524 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 PRPHP41219 470 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 PEX3P56589 373 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 CREMQ03060 361 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 RILPL1Q5EBL4 403 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 C15orf39Q6ZRI6 1047 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 SPATA31D4Q6ZUB0 917 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 CEP57Q86XR8 500 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 CDK5RAP3Q96JB5 506 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 PAAF1Q9BRP4 392 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 PIDD1Q9HB75 910 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 RXFP1Q9HBX9 757 aa17.32■□□□□ 0.36
CHCHD3-204ENST00000457942 MTCL1Q9Y4B5 1905 aaKnown RBP17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 CLUHO75153 1309 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 CCDC195A0A1B0GUA6 201 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 HIP1RO75146 1068 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 RFPL2O75678 378 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 KIF4AO95239 1232 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 RPL17P18621 184 aaKnown RBP17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 GLRA4Q5JXX5 417 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 PRSS55Q6UWB4 352 aaPredicted RBP17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 GET4Q7L5D6 327 aaPredicted RBP17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 GPR152Q8TDT2 470 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 DRC1Q96MC2 740 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 MYADMQ96S97 322 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 CHST7Q9NS84 486 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 SMC3Q9UQE7 1217 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 TRIP11Q15643 1979 aa17.31■□□□□ 0.36
CHCHD3-204ENST00000457942 PTGESO14684 152 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 LRRN2O75325 713 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 EFEMP2O95967 443 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 YARSP54577 528 aaKnown RBP17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 ZNF568Q3ZCX4 644 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 NT5DC1Q5TFE4 455 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 FAM171A1Q5VUB5 890 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 CMASQ8NFW8 434 aaPredicted RBP17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 SMG7Q92540 1137 aaKnown RBP17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 STAMQ92783 540 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 CNTNAP3BQ96NU0 1288 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 RUSC1Q9BVN2 902 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 CNTNAP3Q9BZ76 1288 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 FOXQ1Q9C009 403 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 KMT5AQ9NQR1 393 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 IGSF9Q9P2J2 1179 aa17.3■□□□□ 0.36
CHCHD3-204ENST00000457942 VWA3AA6NCI4 1184 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 TGM5O43548 720 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 SP9P0CG40 484 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 HARSP12081 509 aaKnown RBP17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 NPTX2P47972 431 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 MCM2P49736 904 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 OSTNP61366 133 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 ATP2C1P98194 919 aaPredicted RBP17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 RAD51AP2Q09MP3 1159 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 ELAVL2Q12926 359 aaKnown RBP17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 PSMD5Q16401 504 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 IL17AQ16552 155 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 RTP2Q5QGT7 225 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 PLIN2Q99541 437 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 TCHPQ9BT92 498 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 TTPALQ9BTX7 342 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 CCDC94Q9BW85 323 aaPredicted RBP17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 MRPL4Q9BYD3 311 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms