RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 TROVE2P10155 538 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 RARAP10276 462 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 BRAFP15056 766 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CYP11B1P15538 503 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ATP2A2P16615 1042 aaKnown RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 GARTP22102 1010 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CCND1P24385 295 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TBXAS1P24557 533 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 YWHABP31946 246 aaKnown RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 PHBP35232 272 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 COPB2P35606 906 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SSR1P43307 286 aaKnown RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SLCO1A2P46721 670 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 PEX5P50542 639 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 GPC3P51654 580 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ITGA8P53708 1063 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 NCKAP1LP55160 1127 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SLC8A3P57103 927 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 COPS2P61201 443 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 PSMC5P62195 406 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ELF3P78545 371 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 GTF2BQ00403 316 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 FMO1Q01740 532 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 GCNT1Q02742 428 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 KCNA1Q09470 495 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 PTP4A2Q12974 167 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 MTMR1Q13613 665 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SPARCL1Q14515 664 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 RRP1BQ14684 758 aaKnown RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CRYMQ14894 314 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 NAA25Q14CX7 972 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 E2F5Q15329 346 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TMED2Q15363 201 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CNGA2Q16280 664 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SNRNP35Q16560 246 aaKnown RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CCDC38Q502W7 563 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 FAM102BQ5T8I3 360 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 WDR78Q5VTH9 848 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 HHATQ5VTY9 493 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 IZUMO3Q5VZ72 239 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 NUGGCQ68CJ6 796 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 RNF43Q68DV7 783 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SMYD5Q6GMV2 418 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 STYK1Q6J9G0 422 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 PHLDB3Q6NSJ2 640 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ZNF746Q6NUN9 644 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 XRRA1Q6P2D8 792 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TTC27Q6P3X3 843 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SAMD1Q6SPF0 538 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 MAEAQ7L5Y9 396 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 HAUS6Q7Z4H7 955 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 PCGF5Q86SE9 256 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TBC1D1Q86TI0 1168 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 NOP9Q86U38 636 aaKnown RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 NLRX1Q86UT6 975 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 LDHDQ86WU2 507 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 VSIG1Q86XK7 387 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 DNAAF5Q86Y56 855 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 MAP4K3Q8IVH8 894 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 KSR1Q8IVT5 923 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 APLFQ8IW19 511 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ARHGEF19Q8IW93 802 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 RHOT1Q8IXI2 618 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 C4orf19Q8IY42 314 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SPICE1Q8N0Z3 855 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 AGGF1Q8N302 714 aaeCLIP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 GPD1LQ8N335 351 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 PROCA1Q8NCQ7 364 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 MCPH1Q8NEM0 835 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 UHMK1Q8TAS1 419 aaKnown RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CYP2W1Q8TAV3 490 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 MGARPQ8TDB4 240 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 LRRC8CQ8TDW0 803 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 EPS8L1Q8TE68 723 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 FBXO41Q8TF61 875 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CKAP2Q8WWK9 683 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SPIRE2Q8WWL2 714 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TCP11Q8WWU5 503 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 POMGNT1Q8WZA1 660 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SHC3Q92529 594 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 KRT35Q92764 455 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CD101Q93033 1021 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ATP6V0A1Q93050 837 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CNKSR1Q969H4 720 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 RNF25Q96BH1 459 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 KLHL29Q96CT2 875 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 ZNF317Q96PQ6 595 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 FNBP1Q96RU3 617 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SMC6Q96SB8 1091 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 CBWD1Q9BRT8 395 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TUBB6Q9BUF5 446 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 STRA6Q9BX79 667 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 FRMD8P1Q9BZ68 369 aaPredicted RBP3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 IMPG2Q9BZV3 1241 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 DCLK3Q9C098 648 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 GPR88Q9GZN0 384 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 TMEM117Q9H0C3 514 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 SEMA4AQ9H3S1 761 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 DBNDD1Q9H9R9 158 aa3.55□□□□□ -1.84
HMGN1P18-201ENST00000457642 RXFP1Q9HBX9 757 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms